|
A
| |
| | |
|
Ab
|
antibody
|
|
AdoHCy
|
S-adenosyl-L-homocysteine
|
|
AdoMet
|
S-adenosyl-L-methionine
|
|
ADP
|
adenosine diphosphate
|
|
Ar
|
argon
|
|
5AzaC
|
5-azacytidine
|
| | |
|
B
| |
| | |
|
BAH
|
bromo adjacent homology domain (also called PBHD)
|
|
BDGP
|
Berkeley Drosophila Genome Project
|
|
BLAST
|
Basic Local Alignment Search Tool
|
|
bp
|
base pairs
|
|
BrdU
|
5-bromodeoxyuridine
|
| | |
|
C
| |
| | |
|
C2C12
|
mouse myoblast cell line
|
|
CaPO4
|
calcium phosphate
|
|
CCD
|
charge coupled device
|
|
cdk2
|
cyclin dependent kinase-2
|
|
CENP-B
|
centromere protein B
|
|
CMT
|
chromomethyltransferase
|
|
COS-7
|
african green monkey kidney fibroblast-like cells transformed with SV40 T antigen
|
|
CpA
|
cytosine-adenine doublet
|
|
CpG
|
cytosine-guanine doublet
|
|
Cy5
|
indodicarbocyanine
|
| | |
|
D
| |
| | |
|
DABCO
|
1,4-diazabicyclo[2,2,2]-octane
|
|
DIC
|
differential interference contrast
|
|
DMAP
|
DNMT1-associated protein
|
|
DmDNA Ligase I
|
Drosophila melanogaster DNA Ligase I
|
|
DMEM
|
Dulbecco's Modified Eagle Medium
|
|
DmPCNA
|
Drosophila melanogaster PCNA
|
|
DMSO
|
dimethyl sulfoxide
|
|
DNA
|
deoxyribonucleic acid
|
|
DNA MTase
|
DNA methyltransferase
|
|
DNase
|
deoxyribonuclease
|
|
DsRed
|
red fluorescent protein from Discosoma species
|
| | |
|
E
| |
| | |
|
EC
|
embryonic carcinoma
|
|
EDTA
|
ethylenediaminetetraacetic acid
|
|
ES
|
embryonic stem cells
|
|
EST
|
expressed sequence tag
|
|
E-value
|
expectation value
|
|
| |
|
F
| |
| | |
|
FCS
|
fetal calf serum
|
|
FITC
|
fluorescein isothiocyanate
|
| | |
|
G
| |
| | |
|
G1
|
gap 1 phase
|
|
G2
|
gap 2 phase
|
|
G418
|
geneticin
|
|
GFP
|
green fluorescent protein
|
| | |
|
H
| |
| | |
|
H167V
|
mutation of histidine at position 167 to valine in DNMT1
|
|
H2A
|
histone H2A
|
|
H2B
|
histone H2B
|
|
H3
|
histone H3
|
|
H3K9Me
|
histone H3 methylated at lysine at position 9
|
|
H4
|
histone H4
|
|
HDAC
|
histone deacetylase
|
|
HeNe
|
helium neon
|
|
HP-1
|
heterochromatin protein 1
|
|
hr
|
hours
|
|
HsDNA Ligase I
|
human DNA Ligase I
|
|
HsPCNA
|
human PCNA
|
| | |
|
I
| |
| | |
|
ICF
|
immunodeficiency, centromeric instability and facial anomalies
|
| | |
|
K
| |
| | |
|
kbp
|
kilobase pairs
|
|
kDa
|
kilo Dalton
|
| | |
|
M
| |
| | |
|
M
|
mitosis
|
|
MBD
|
methyl-CpG-binding domain
|
|
Mbp
|
megabase pairs
|
|
5mC
|
C5-methylcytosine
|
|
MeCP
|
methyl-CpG-binding protein
|
|
mM
|
millimolar
|
| | |
|
N
| |
| | |
|
neo
r
|
neomycin resistance gene
|
|
NLS
|
nuclear localization signal
|
|
NuRD
|
nucleosome remodelling and histone deacetylation complex
|
| | |
|
P
| |
| | |
|
PAGE
|
polyacrylamide gel electrophoresis
|
|
PBD
|
PCNA binding domain
|
|
PBHD
|
polybromo homology domain (also called BAH domain)
|
|
PBS
|
phosphate buffered saline
|
|
PCNA
|
proliferating cell nuclear antigen
|
|
PCR
|
polymerase chain reaction
|
|
pol
|
DNA polymerase
|
|
PSI-BLAST
|
position-specific iterated BLAST
|
|
PVDF
|
polyvinylidene fluoride
|
| | |
|
R
| |
| | |
|
RF
|
replication foci
|
|
RFP
|
red fluorescent protein
|
|
RFTS
|
replication factory targeting sequence
|
|
RPA-70
|
70 kDa subunit of replication protein A
|
| | |
|
S
| |
| | |
|
S
|
Synthesis phase
|
|
S2
|
Drosophila Schneider’s line 2 cells
|
|
S514A
|
mutation of serine at position 514 to alanine in DNMT1
|
|
S514D
|
mutation of serine at position 514 to aspartate in DNMT1
|
|
SAH
|
S-adenosyl-L-homocysteine
|
|
SAM
|
S-adenosyl-L-methionine
|
|
ScPCNA
|
Saccharomyces cerevisiae PCNA
|
|
SDS
|
sodium dodecylsulphate
|
|
SV40
|
simian virus 40
|
| | |
|
T
| |
| | |
|
293T
|
human embryonic kidney cells transformed with SV40 T antigen
|
|
TR
|
texas red
|
|
Tris
|
tris (hydroxymethyl) aminomethane
|
|
TS
|
targeting sequence
|
| | |
| | |
| | |
|
W
| |
| | |
|
WSTF
|
Williams syndrome transcription factor
|
| | |
|
Y
| |
| | |
|
YFP
|
yellow fluorescent protein
|
| | |
|
Z
| |
| | |
|
Zn
|
zinc
|
| | |
|
ß
| |
| | |
|
ß-gal
|
betagalactosidase epitope
|
| | |
|
µ
| |
| | |
|
µm
|
micrometer
|
|
µM
|
micromolar
|