<?xml version="1.0" encoding="ISO-8859-1"?><cms:container xmlns:cms="http://edoc.hu-berlin.de/diml/module/cms"><cms:document><cms:meta><cms:entry id="front" part="front" ref="front" type="front"/><cms:entry id="_Toc119564310" part="front" ref="_Toc119564310" type="link"/><cms:entry type="title">Prevalence analysis of putative periodontal pathogens in patients with aggressive periodontitis and healthy elderly. A molecular study</cms:entry><cms:entry type="author">Lilian  Edesi-Neuss</cms:entry><cms:entry id="_Toc119564311" part="front" ref="_Toc119564311" type="link"/><cms:entry id="_Toc119564312" part="front" ref="_Toc119564312" type="link"/><cms:entry id="chapter1" part="chapter1" ref="chapter1" type="chapter">1</cms:entry><cms:entry id="_Toc119564314" part="chapter1" ref="_Toc119564314" type="link"/><cms:entry id="N1012B" part="chapter1" ref="N1012B" type="citenumber">1</cms:entry><cms:entry id="N10135" part="chapter1" ref="N10135" type="section">1.1</cms:entry><cms:entry id="_Toc119564315" part="chapter1" ref="_Toc119564315" type="link"/><cms:entry id="N1013F" part="chapter1" ref="N1013F" type="citenumber">2</cms:entry><cms:entry id="_Toc119564316" part="chapter1" ref="_Toc119564316" type="link"/><cms:entry id="N101A3" part="chapter1" ref="N101A3" type="section">1.2</cms:entry><cms:entry id="N101AA" part="chapter1" ref="N101AA" type="citenumber">3</cms:entry><cms:entry id="N101CB" part="chapter1" ref="N101CB" type="citenumber">4</cms:entry><cms:entry id="N101D9" part="chapter1" ref="N101D9" type="citenumber">5</cms:entry><cms:entry id="N101E5" part="chapter1" ref="N101E5" type="citenumber">6</cms:entry><cms:entry id="N1020D" part="chapter1" ref="N1020D" type="subsection">1.2.1</cms:entry><cms:entry id="_Toc119564317" part="chapter1" ref="_Toc119564317" type="link"/><cms:entry id="_Toc119564318" part="chapter1" ref="_Toc119564318" type="link"/><cms:entry id="N1021F" part="chapter1" ref="N1021F" type="subsection">1.2.2</cms:entry><cms:entry id="N10226" part="chapter1" ref="N10226" type="citenumber">7</cms:entry><cms:entry id="_Toc119564319" part="chapter1" ref="_Toc119564319" type="link"/><cms:entry id="N10237" part="chapter1" ref="N10237" type="subsection">1.2.3</cms:entry><cms:entry id="N10248" part="chapter1" ref="N10248" type="table"/><cms:entry id="N10385" part="chapter1" ref="N10385" type="citenumber">8</cms:entry><cms:entry id="_Toc119564320" part="chapter1" ref="_Toc119564320" type="link"/><cms:entry id="N103A2" part="chapter1" ref="N103A2" type="subsection">1.2.4</cms:entry><cms:entry id="N103AC" part="chapter1" ref="N103AC" type="citenumber">9</cms:entry><cms:entry id="_Toc119564321" part="chapter1" ref="_Toc119564321" type="link"/><cms:entry id="N103EE" part="chapter1" ref="N103EE" type="subsection">1.2.5</cms:entry><cms:entry id="_Toc119564322" part="chapter1" ref="_Toc119564322" type="link"/><cms:entry id="N103FF" part="chapter1" ref="N103FF" type="subsection">1.2.6</cms:entry><cms:entry id="N10406" part="chapter1" ref="N10406" type="citenumber">10</cms:entry><cms:entry id="_Toc119564323" part="chapter1" ref="_Toc119564323" type="link"/><cms:entry id="N104A0" part="chapter1" ref="N104A0" type="section">1.3</cms:entry><cms:entry id="N104BC" part="chapter1" ref="N104BC" type="citenumber">11</cms:entry><cms:entry id="_Toc119564324" part="chapter1" ref="_Toc119564324" type="link"/><cms:entry id="N104D1" part="chapter1" ref="N104D1" type="section">1.4</cms:entry><cms:entry id="N104D8" part="chapter1" ref="N104D8" type="citenumber">12</cms:entry><cms:entry id="N104DE" part="chapter1" ref="N104DE" type="subsection">1.4.1</cms:entry><cms:entry id="_Toc119564325" part="chapter1" ref="_Toc119564325" type="link"/><cms:entry id="_Toc119564326" part="chapter1" ref="_Toc119564326" type="link"/><cms:entry id="N10502" part="chapter1" ref="N10502" type="subsection">1.4.2</cms:entry><cms:entry id="_Toc119564327" part="chapter1" ref="_Toc119564327" type="link"/><cms:entry id="N1053F" part="chapter1" ref="N1053F" type="subsection">1.4.3</cms:entry><cms:entry id="N10546" part="chapter1" ref="N10546" type="citenumber">13</cms:entry><cms:entry id="_Toc119564328" part="chapter1" ref="_Toc119564328" type="link"/><cms:entry id="N1055A" part="chapter1" ref="N1055A" type="subsection">1.4.4</cms:entry><cms:entry id="_Toc119564329" part="chapter1" ref="_Toc119564329" type="link"/><cms:entry id="N10586" part="chapter1" ref="N10586" type="section">1.5</cms:entry><cms:entry id="_Toc119564330" part="chapter1" ref="_Toc119564330" type="link"/><cms:entry id="N1059D" part="chapter1" ref="N1059D" type="section">1.6</cms:entry><cms:entry id="N105A2" part="chapter1" ref="N105A2" type="subsection">1.6.1</cms:entry><cms:entry id="_Toc119564331" part="chapter1" ref="_Toc119564331" type="link"/><cms:entry id="N105AC" part="chapter1" ref="N105AC" type="citenumber">14</cms:entry><cms:entry id="N105CF" part="chapter1" ref="N105CF" type="citenumber">15</cms:entry><cms:entry id="N10617" part="chapter1" ref="N10617" type="citenumber">16</cms:entry><cms:entry id="_Toc119564332" part="chapter1" ref="_Toc119564332" type="link"/><cms:entry id="N10646" part="chapter1" ref="N10646" type="subsection">1.6.2</cms:entry><cms:entry id="_Toc119564333" part="chapter1" ref="_Toc119564333" type="link"/><cms:entry id="N10677" part="chapter1" ref="N10677" type="section">1.7</cms:entry><cms:entry id="N1067E" part="chapter1" ref="N1067E" type="citenumber">17</cms:entry><cms:entry id="chapter2" part="chapter2" ref="chapter2" type="chapter">2</cms:entry><cms:entry id="_Toc119564334" part="chapter2" ref="_Toc119564334" type="link"/><cms:entry id="N1068E" part="chapter2" ref="N1068E" type="helpercitenumber">17</cms:entry><cms:entry id="chapter3" part="chapter3" ref="chapter3" type="chapter">3</cms:entry><cms:entry id="_Toc119564335" part="chapter3" ref="_Toc119564335" type="link"/><cms:entry id="N106C2" part="chapter3" ref="N106C2" type="section">3.1</cms:entry><cms:entry id="_Toc119564336" part="chapter3" ref="_Toc119564336" type="link"/><cms:entry id="N106CA" part="chapter3" ref="N106CA" type="helpercitenumber">17</cms:entry><cms:entry id="N106CF" part="chapter3" ref="N106CF" type="citenumber">18</cms:entry><cms:entry id="_Toc119564337" part="chapter3" ref="_Toc119564337" type="link"/><cms:entry id="N106FA" part="chapter3" ref="N106FA" type="section">3.2</cms:entry><cms:entry id="N10704" part="chapter3" ref="N10704" type="citenumber">19</cms:entry><cms:entry id="N10764" part="chapter3" ref="N10764" type="citenumber">20</cms:entry><cms:entry id="N10775" part="chapter3" ref="N10775" type="citenumber">21</cms:entry><cms:entry id="_Toc119564338" part="chapter3" ref="_Toc119564338" type="link"/><cms:entry id="N1079C" part="chapter3" ref="N1079C" type="section">3.3</cms:entry><cms:entry id="_Toc119564339" part="chapter3" ref="_Toc119564339" type="link"/><cms:entry id="N107AB" part="chapter3" ref="N107AB" type="section">3.4</cms:entry><cms:entry id="N107B2" part="chapter3" ref="N107B2" type="citenumber">22</cms:entry><cms:entry id="N107BE" part="chapter3" ref="N107BE" type="citenumber">23</cms:entry><cms:entry id="N107CA" part="chapter3" ref="N107CA" type="citenumber">24</cms:entry><cms:entry id="N107D6" part="chapter3" ref="N107D6" type="citenumber">25</cms:entry><cms:entry id="_Toc119564340" part="chapter3" ref="_Toc119564340" type="link"/><cms:entry id="N107F9" part="chapter3" ref="N107F9" type="section">3.5</cms:entry><cms:entry id="N10805" part="chapter3" ref="N10805" type="citenumber">26</cms:entry><cms:entry id="_Toc119564341" part="chapter3" ref="_Toc119564341" type="link"/><cms:entry id="N1083F" part="chapter3" ref="N1083F" type="section">3.6</cms:entry><cms:entry id="N10846" part="chapter3" ref="N10846" type="citenumber">27</cms:entry><cms:entry id="_Toc119564342" part="chapter3" ref="_Toc119564342" type="link"/><cms:entry id="N10891" part="chapter3" ref="N10891" type="section">3.7</cms:entry><cms:entry id="N10896" part="chapter3" ref="N10896" type="subsection">3.7.1</cms:entry><cms:entry id="_Toc119564343" part="chapter3" ref="_Toc119564343" type="link"/><cms:entry id="N108A0" part="chapter3" ref="N108A0" type="citenumber">28</cms:entry><cms:entry id="_Toc119564344" part="chapter3" ref="_Toc119564344" type="link"/><cms:entry id="N108B3" part="chapter3" ref="N108B3" type="subsection">3.7.2</cms:entry><cms:entry id="N108C0" part="chapter3" ref="N108C0" type="citenumber">29</cms:entry><cms:entry id="_Toc119564345" part="chapter3" ref="_Toc119564345" type="link"/><cms:entry id="N108EA" part="chapter3" ref="N108EA" type="section">3.8</cms:entry><cms:entry id="N108FA" part="chapter3" ref="N108FA" type="citenumber">30</cms:entry><cms:entry id="_Toc119564346" part="chapter3" ref="_Toc119564346" type="link"/><cms:entry id="chapter4" part="chapter4" ref="chapter4" type="chapter">4</cms:entry><cms:entry id="N1090B" part="chapter4" ref="N1090B" type="helpercitenumber">30</cms:entry><cms:entry id="_Toc119564347" part="chapter4" ref="_Toc119564347" type="link"/><cms:entry id="chapter5" part="chapter5" ref="chapter5" type="chapter">5</cms:entry><cms:entry id="N1092A" part="chapter5" ref="N1092A" type="section">5.1</cms:entry><cms:entry id="_Toc119564348" part="chapter5" ref="_Toc119564348" type="link"/><cms:entry id="N10932" part="chapter5" ref="N10932" type="helpercitenumber">30</cms:entry><cms:entry id="N10950" part="chapter5" ref="N10950" type="citenumber">31</cms:entry><cms:entry id="N10953" part="chapter5" ref="N10953" type="table"/><cms:entry id="_Toc119564349" part="chapter5" ref="_Toc119564349" type="link"/><cms:entry id="N10BCE" part="chapter5" ref="N10BCE" type="section">5.2</cms:entry><cms:entry id="N10BD8" part="chapter5" ref="N10BD8" type="citenumber">32</cms:entry><cms:entry id="_Toc119564350" part="chapter5" ref="_Toc119564350" type="link"/><cms:entry id="N10BEA" part="chapter5" ref="N10BEA" type="section">5.3</cms:entry><cms:entry id="N10C17" part="chapter5" ref="N10C17" type="mm">604#299</cms:entry><cms:entry id="N10C22" part="chapter5" ref="N10C22" type="citenumber">33</cms:entry><cms:entry id="N10C6F" part="chapter5" ref="N10C6F" type="mm">615#308</cms:entry><cms:entry id="N10CA0" part="chapter5" ref="N10CA0" type="citenumber">34</cms:entry><cms:entry id="N10CA3" part="chapter5" ref="N10CA3" type="mm">626#286</cms:entry><cms:entry id="N10CB1" part="chapter5" ref="N10CB1" type="mm">614#276</cms:entry><cms:entry id="N10CBC" part="chapter5" ref="N10CBC" type="citenumber">35</cms:entry><cms:entry id="N10CD3" part="chapter5" ref="N10CD3" type="mm">614#307</cms:entry><cms:entry id="N10CEC" part="chapter5" ref="N10CEC" type="citenumber">36</cms:entry><cms:entry id="N10CEF" part="chapter5" ref="N10CEF" type="mm">605#690</cms:entry><cms:entry id="_Toc119564351" part="chapter5" ref="_Toc119564351" type="link"/><cms:entry id="N10D36" part="chapter5" ref="N10D36" type="section">5.4</cms:entry><cms:entry id="N10D40" part="chapter5" ref="N10D40" type="citenumber">37</cms:entry><cms:entry id="N10D43" part="chapter5" ref="N10D43" type="table"/><cms:entry id="_Toc119564352" part="chapter5" ref="_Toc119564352" type="link"/><cms:entry ref="chapter6" type="chapter">6</cms:entry><cms:entry ref="N1125D" type="helpercitenumber">37</cms:entry><cms:entry ref="N11262" type="section">6.1</cms:entry><cms:entry ref="_Toc119564353" type="link"/><cms:entry ref="N1126C" type="citenumber">38</cms:entry><cms:entry ref="N1129D" type="citenumber">39</cms:entry><cms:entry ref="N112DB" type="citenumber">40</cms:entry><cms:entry ref="_Toc119564354" type="link"/><cms:entry ref="N112EF" type="section">6.2</cms:entry><cms:entry ref="N112F4" type="subsection">6.2.1</cms:entry><cms:entry ref="_Toc119564355" type="link"/><cms:entry ref="N1130A" type="citenumber">41</cms:entry><cms:entry ref="N1134D" type="citenumber">42</cms:entry><cms:entry ref="_Toc119564356" type="link"/><cms:entry ref="N1138C" type="subsection">6.2.2</cms:entry><cms:entry ref="N113C8" type="citenumber">43</cms:entry><cms:entry ref="_Toc119564357" type="link"/><cms:entry ref="N11419" type="subsection">6.2.3</cms:entry><cms:entry ref="_Toc119564358" type="link"/><cms:entry ref="N1149C" type="subsection">6.2.4</cms:entry><cms:entry ref="N114A6" type="citenumber">44</cms:entry><cms:entry ref="_Toc119564359" type="link"/><cms:entry ref="N114D8" type="subsection">6.2.5</cms:entry><cms:entry ref="_Toc119564360" type="link"/><cms:entry ref="N11529" type="subsection">6.2.6</cms:entry><cms:entry ref="N11576" type="citenumber">45</cms:entry><cms:entry ref="_Toc119564361" type="link"/><cms:entry ref="N115A3" type="subsection">6.2.7</cms:entry><cms:entry ref="_Toc119564362" type="link"/><cms:entry ref="N115CB" type="subsection">6.2.8</cms:entry><cms:entry ref="_Toc119564363" type="link"/><cms:entry ref="N115F9" type="subsection">6.2.9</cms:entry><cms:entry ref="N11603" type="citenumber">46</cms:entry><cms:entry ref="_Toc119564364" type="link"/><cms:entry ref="N1162C" type="subsection">6.2.10</cms:entry><cms:entry ref="_Toc119564365" type="link"/><cms:entry ref="N1164D" type="subsection">6.2.11</cms:entry><cms:entry ref="N11659" type="citenumber">47</cms:entry><cms:entry ref="N116E2" type="citenumber">48</cms:entry><cms:entry ref="_Toc119564366" type="link"/><cms:entry ref="N11719" type="section">6.3</cms:entry><cms:entry ref="_Toc119564367" type="link"/><cms:entry ref="N1175A" type="section">6.4</cms:entry><cms:entry ref="N1176A" type="citenumber">49</cms:entry><cms:entry ref="N1177E" type="citenumber">50</cms:entry><cms:entry ref="_Toc119564368" type="link"/><cms:entry id="chapter7" part="chapter7" ref="chapter7" type="chapter">7</cms:entry><cms:entry id="N1178F" part="chapter7" ref="N1178F" type="helpercitenumber">50</cms:entry><cms:entry id="_Toc119564369" part="chapter7" ref="_Toc119564369" type="link"/><cms:entry id="chapter8" part="chapter8" ref="chapter8" type="chapter">8</cms:entry><cms:entry id="N117F7" part="chapter8" ref="N117F7" type="helpercitenumber">50</cms:entry><cms:entry id="_Toc119564370" part="chapter8" ref="_Toc119564370" type="link"/><cms:entry id="chapter9" part="chapter9" ref="chapter9" type="chapter">9</cms:entry><cms:entry id="N11851" part="chapter9" ref="N11851" type="section">9.1</cms:entry><cms:entry id="_Toc119564371" part="chapter9" ref="_Toc119564371" type="link"/><cms:entry id="N1185B" part="chapter9" ref="N1185B" type="citenumber">51</cms:entry><cms:entry id="N1185E" part="chapter9" ref="N1185E" type="table"/><cms:entry id="N11F69" part="chapter9" ref="N11F69" type="table"/><cms:entry id="_Toc119564372" part="chapter9" ref="_Toc119564372" type="link"/><cms:entry id="N1265A" part="chapter9" ref="N1265A" type="section">9.2</cms:entry><cms:entry id="N1265F" part="chapter9" ref="N1265F" type="subsection">9.2.1</cms:entry><cms:entry id="_Toc119564373" part="chapter9" ref="_Toc119564373" type="link"/><cms:entry id="N12667" part="chapter9" ref="N12667" type="block">9.2.1.1</cms:entry><cms:entry id="_Toc119564374" part="chapter9" ref="_Toc119564374" type="link"/><cms:entry id="N12674" part="chapter9" ref="N12674" type="citenumber">52</cms:entry><cms:entry id="N1267D" part="chapter9" ref="N1267D" type="table"/><cms:entry id="N127AB" part="chapter9" ref="N127AB" type="table"/><cms:entry id="N12851" part="chapter9" ref="N12851" type="citenumber">53</cms:entry><cms:entry id="N12857" part="chapter9" ref="N12857" type="table"/><cms:entry id="N128C8" part="chapter9" ref="N128C8" type="citenumber">54</cms:entry><cms:entry id="N128CB" part="chapter9" ref="N128CB" type="table"/><cms:entry id="_Toc119564375" part="chapter9" ref="_Toc119564375" type="link"/><cms:entry id="N12934" part="chapter9" ref="N12934" type="block">9.2.1.2</cms:entry><cms:entry id="N1293B" part="chapter9" ref="N1293B" type="table"/><cms:entry id="_Toc119564376" part="chapter9" ref="_Toc119564376" type="link"/><cms:entry id="N129B0" part="chapter9" ref="N129B0" type="block">9.2.1.3</cms:entry><cms:entry id="N129B7" part="chapter9" ref="N129B7" type="table"/><cms:entry id="_Toc119564377" part="chapter9" ref="_Toc119564377" type="link"/><cms:entry id="N12A56" part="chapter9" ref="N12A56" type="block">9.2.1.4</cms:entry><cms:entry id="N12A5D" part="chapter9" ref="N12A5D" type="citenumber">55</cms:entry><cms:entry id="N12A63" part="chapter9" ref="N12A63" type="table"/><cms:entry id="N12AB1" part="chapter9" ref="N12AB1" type="citenumber">56</cms:entry><cms:entry id="N12AB4" part="chapter9" ref="N12AB4" type="table"/><cms:entry id="_Toc119564378" part="chapter9" ref="_Toc119564378" type="link"/><cms:entry id="N12B26" part="chapter9" ref="N12B26" type="block">9.2.1.5</cms:entry><cms:entry id="N12B2D" part="chapter9" ref="N12B2D" type="table"/><cms:entry id="_Toc119564379" part="chapter9" ref="_Toc119564379" type="link"/><cms:entry id="N12B6F" part="chapter9" ref="N12B6F" type="block">9.2.1.6</cms:entry><cms:entry id="N12B7C" part="chapter9" ref="N12B7C" type="citenumber">57</cms:entry><cms:entry id="N12B7F" part="chapter9" ref="N12B7F" type="table"/><cms:entry id="N12BB2" part="chapter9" ref="N12BB2" type="table"/><cms:entry id="N12BF1" part="chapter9" ref="N12BF1" type="citenumber">58</cms:entry><cms:entry id="N12BF4" part="chapter9" ref="N12BF4" type="table"/><cms:entry id="N12C8F" part="chapter9" ref="N12C8F" type="table"/><cms:entry id="_Toc119564380" part="chapter9" ref="_Toc119564380" type="link"/><cms:entry id="N12CDF" part="chapter9" ref="N12CDF" type="subsection">9.2.2</cms:entry><cms:entry id="N12CE4" part="chapter9" ref="N12CE4" type="block">9.2.2.1</cms:entry><cms:entry id="_Toc119564381" part="chapter9" ref="_Toc119564381" type="link"/><cms:entry id="N12CEE" part="chapter9" ref="N12CEE" type="citenumber">59</cms:entry><cms:entry id="_Toc119564382" part="chapter9" ref="_Toc119564382" type="link"/><cms:entry id="N12CFD" part="chapter9" ref="N12CFD" type="block">9.2.2.2</cms:entry><cms:entry id="_Toc119564383" part="chapter9" ref="_Toc119564383" type="link"/><cms:entry id="N12D10" part="chapter9" ref="N12D10" type="block">9.2.2.3</cms:entry><cms:entry id="_Toc119564384" part="chapter9" ref="_Toc119564384" type="link"/><cms:entry id="N12D23" part="chapter9" ref="N12D23" type="block">9.2.2.4</cms:entry><cms:entry id="N12D2A" part="chapter9" ref="N12D2A" type="citenumber">60</cms:entry><cms:entry id="_Toc119564385" part="chapter9" ref="_Toc119564385" type="link"/><cms:entry id="N12D3B" part="chapter9" ref="N12D3B" type="block">9.2.2.5</cms:entry><cms:entry id="_Toc119564386" part="chapter9" ref="_Toc119564386" type="link"/><cms:entry id="N12D4C" part="chapter9" ref="N12D4C" type="block">9.2.2.6</cms:entry><cms:entry id="_Toc119564387" part="chapter9" ref="_Toc119564387" type="link"/><cms:entry id="N12D5D" part="chapter9" ref="N12D5D" type="block">9.2.2.7</cms:entry><cms:entry id="N12D64" part="chapter9" ref="N12D64" type="citenumber">61</cms:entry><cms:entry id="_Toc119564388" part="chapter9" ref="_Toc119564388" type="link"/><cms:entry id="N12D71" part="chapter9" ref="N12D71" type="block">9.2.2.8</cms:entry><cms:entry id="_Toc119564389" part="chapter9" ref="_Toc119564389" type="link"/><cms:entry id="N12D82" part="chapter9" ref="N12D82" type="block">9.2.2.9</cms:entry><cms:entry id="_Toc119564390" part="chapter9" ref="_Toc119564390" type="link"/><cms:entry id="N12D99" part="chapter9" ref="N12D99" type="block">9.2.2.10</cms:entry><cms:entry id="N12DA0" part="chapter9" ref="N12DA0" type="citenumber">62</cms:entry><cms:entry id="_Toc119564391" part="chapter9" ref="_Toc119564391" type="link"/><cms:entry id="N12DB1" part="chapter9" ref="N12DB1" type="block">9.2.2.11</cms:entry><cms:entry id="_Toc119564392" part="chapter9" ref="_Toc119564392" type="link"/><cms:entry id="N12DC9" part="chapter9" ref="N12DC9" type="subsection">9.2.3</cms:entry><cms:entry id="N12DCE" part="chapter9" ref="N12DCE" type="block">9.2.3.1</cms:entry><cms:entry id="_Toc119564393" part="chapter9" ref="_Toc119564393" type="link"/><cms:entry id="_Toc119564394" part="chapter9" ref="_Toc119564394" type="link"/><cms:entry id="N12DE4" part="chapter9" ref="N12DE4" type="block">9.2.3.2</cms:entry><cms:entry id="N12DEB" part="chapter9" ref="N12DEB" type="citenumber">63</cms:entry><cms:entry id="_Toc119564395" part="chapter9" ref="_Toc119564395" type="link"/><cms:entry ref="N12E06" type="back"/><cms:entry id="N12E08" part="N12E08" ref="N12E08" type="bibliography">References</cms:entry><cms:entry id="N1515E" part="N1515E" ref="N1515E" type="acknowledgement">
            
            Danksagung</cms:entry><cms:entry id="_Toc471900148" part="N1515E" ref="_Toc471900148" type="link"/><cms:entry id="_Toc119564396" part="N1515E" ref="_Toc119564396" type="link"/><cms:entry id="N15176" part="N15176" ref="N15176" type="vita">
            
            Lebenslauf</cms:entry><cms:entry id="_Toc471900149" part="N15176" ref="_Toc471900149" type="link"/><cms:entry id="_Toc119564397" part="N15176" ref="_Toc119564397" type="link"/><cms:entry id="N15183" part="N15176" ref="N15183" type="table"/><cms:entry id="N1529A" part="N1529A" ref="N1529A" type="declaration">
            
            Eidestattliche Erklärung</cms:entry><cms:entry id="_Toc471900150" part="N1529A" ref="_Toc471900150" type="link"/><cms:entry id="_Toc119564398" part="N1529A" ref="_Toc119564398" type="link"/><cms:entry part="chapter6" type=":current"/><cms:entry type=":lang">en</cms:entry><cms:entry id=":contents" part="front" ref=":contents" type=":contents">Table of contents</cms:entry><cms:entry type=":help"><url href="http://...">Help</url></cms:entry></cms:meta><cms:content><chapter id="chapter6" label="6">
         <head>Discussion</head>
         <p><citenumber helper="true" id="N1125D" start="37"/>The oral cavity presents an ecosystem where the members of the indigenous microbiota have no adverse effects on the host as long as the host-bacterial relationship is in balance. The same flora, or some members of this flora, may cause periodontal disease if the general resistance of the host or the local resistance of the gingival tissues is reduced. Bacteria can be considered the primary etiological agents in the periodontal disease process, but the clinical extent and severity of the disease is modified by both environmental and host risk factors. Most of the tissue destruction comes from the direct effect of the bacteria, together with the resulting inflammatory and immunological host responses. Understanding these interrelations between microbial activity and host response is crucial for preventive or therapeutic measures. A number of possible etiologically relevant pathogens have been suggested based upon the strength of the evidence of their association with disease, animal pathogenicity, and virulence factors. Attempts have been made to find etiological associations of certain bacterial pathogens with clinically different forms of periodontitis. A small subset of microorganisms has been suggested as primary etiological agents in the pathogenesis of aggressive periodontitis. However, the epidemiological studies have not yet revealed any constant correlation between the different bacteriological parameters that lead to a diagnosis of aggressive periodontitis (52, 180). <br/>The aim of the present investigation was to study the associations of the suggested pathogens with generalized aggressive periodontitis and the periodontal status of healthy elderly individuals using molecular biological methods.</p>
         <section id="N11262" label="6.1">
            <head>
               <link id="_Toc119564353"/>Detection methods</head>
            <p>
               <citenumber id="N1126C" start="38"/>A variety of methods with different sensitivity and specificity have been used to detect and identify microorganisms complicating the comparability of studies. <br/>Selective bacterial culture has been the classical method used to identify and enumerate the most probable number of specific microorganisms in clinical specimens. However, this approach is hampered by the fact that it does not accurately reflect true microbial populations, as many species, especially anaerobes, cannot be grown in vitro due to their fastidious nature or that they are unable to survive the stress of sampling, dispersion, oxygen exposure, or lack of suitable nutrients in the culture media (181, 182). An additional disadvantage of the cumbersome culturing technique is the limited number of samples and subjects that can be investigated.<br/>In earlier research an inadequate identification and taxonomy could have led to misinterpretation. For instance, the common term "black-pigmented Bacteroides species" comprises a broad category of gram-negative anaerobic rods that form black-pigmented colonies, only some of which are species relevant in gingivitis, periodontitis, endodontic infection and odontogenic abscesses (183,184). The development in phylogenetic analysis of 16S rRNA has clarified the position of the Bacteroides subgroup and its clusters in the phylogenetic classification (185). The use of inaccurately identified and characterized type strains raises problems not only in taxonomic studies, but also for the subsequent identification, classification, and characterization of clinical isolates (186).<br/>Culture-based techniques, though not adequate, are often used as a reference against which other tests like nucleic acid hybridization assay, PCR amplification, or immunological methods are compared and validated (161, 173, 187-189). Often the culture-independent methods showed the presence of the bacterium, but the bacterial culture was negative (11, 161, 164). It has been assumed that the culture-based method especially underestimates the presence of <em>A. actinomycetemcomitans</em>, <em>P. gingivalis</em>, and <em>T. forsythensis</em> (11, 161, 173, 189-192). Conrads however, demonstrated high conformity between the bacterial culture and the hybridization assay for the detection of <em>P. intermedia</em> and <em>P. gingivalis</em> (193). The culture-independent methods are definitively superior in detecting fastidious anaerobes, as well as in identification of cultivable bacterial strains with phenotypically divergent behaviour.<br/>Because of the absence of an indisputable reference standard, no definitive conclusions may be drawn on the capability of any given method to better reflect reality. However, the use of inadequate uncontrolled detection methods has often resulted in an incorrect microbiologic analysis. </p>
            <p>Immunoassays which use either species-specific polyclonal antiserum or monoclonal antibodies (mAb) are sensitive, and allow enumeration of bacterial cells, but need exhaustive microscopy. The disadvantage is that some members of a given species can be non-reactive with the serological agents available so far or that other bacteria express cross-reacting epitopes (181, 194). <br/>Gmür reported about the frequent detection of <em>T. forsythensis</em> in high numbers by immunofluorescence, but the culture analysis was consistently negative (195). It was necessary to use three mAbs for distinct epitopes of <em>T. forsythensis</em> in order to rule out false negative results (182). For <em>P. gingivalis</em> and <em>P. intermedia</em> culture scores were similar or lower than those obtained with the serological technique. </p>
            <p>Microbiology has recently entered a state of transition, changing from traditional culture-based methods towards the identification of specific nucleic acid sequences by applying more sensitive nucleic acid hybridization and in vitro amplification techniques (161, 164). Besides culturable organisms the methods enable the detection and identification of yet uncultured bacteria (168). However, false positive as well as negative reactions of the molecular genetic methods have to be considered (187, 188, 196). On the other hand, the higher sensitivity of the culture-independent assays can explain the discrepancies between the methods (173). The specificity of the assays is obviously dependent on the accuracy and completeness of the database, as well as the selection of the target sequence. This seems to be an inherent limitation of the experimental design since probe design relies on the extent and the availability of bacterial DNA sequences (197).</p>
            <p>
               <citenumber id="N1129D" start="39"/>The polymerase chain reaction (PCR) can detect as few as 10-50 CFU/ml in a pure culture and has, therefore, the highest sensitivity of any microbiological method (181, 198). The detection limit in artificially infected subgingival plaque is approximately 102-103 CFU/ml (199, 200). The detection of minute amounts of bacteria with ultrasensitive methods is probably clinically irrelevant. Bacterial amounts below the detection level of 102 CFU/ml are produced by transient rather than by colonizing microorganisms (201).<br/>The PCR-amplification using species-specific primers has been broadly used for the detection of periodontal bacteria. Several targets for primer annealing have been reported, as for example <em>A. actinomycetemcomitans</em>' leukotoxin gene-directed primers (199), for <em>P. gingivalis</em> collagenase gene-directed primers (200), and for several periodontal species 16S rRNA gene (rDNA)-directed primers (11). False-positive results with the PCR method can not be excluded. Phylogenetically closely related species might have 16S rRNA genes that differ in only a few nucleotides and might not be distinguishable by 16S rRNA gene analysis. Also the conditions of PCR performance (annealing temperature, magnesium concentration) are crucial in order to avoid cross-reactivity (198, 199). Bacterial species not thoroughly studied can contain genes with some homology with the target gene. Therefore, the identity of an amplicon has to be confirmed by an additional detection assay, e.g. hybridization with a probe different from the primers or by sequencing (162). The PCR-amplification method is prone to contamination, possibly leading to false positive results.<br/>False-negative results can emerge from PCR performance failures due to inhibitors or from an incomplete knowledge of heterogeneity of the target genes. Molecular analysis of 16S rRNA genes gained from subgingival bacterial samples revealed a diversity of clones for the investigated species (202). Only 70% of all the analyzed sequences showed a similarity of at least 99% identical to investigated periodontal pathogens. <br/>The sequence analysis of the collagenase gene of <em>P. gingivalis</em> clinical isolates verified the genetic heterogeneity among the clinical strains (203). Furthermore, not all <em>P. gingivalis</em> strains contain the selected fragment of the collagenase gene (200). As a consequence, not all strains of a given species will be the targets of the detection assay. This can be of advantage in detecting virulent strains. However, the biological relevance still remains unclear. </p>
            <p>Nucleic acid probe assays use a piece of DNA or RNA - either a whole-genomic probe, a cloned probe, or a synthetic oligonucleotide probe - to hybridize to a complementary nucleic acid sequences in the target microorganism. <br/>The whole-genomic probes are widely used in the detection of periodontal species (36, 191, 204-206). Socransky et al. introduced a checkerboard DNA-DNA hybridization assay for hybridizing large numbers of DNA samples with multiple whole-genomic DNA probes on a single support membrane (207). This method requires sophisticated laboratory equipment and expertise. The disadvantage of genomic probes is the cross-reactivity of 1%, as well as their undefined composition from pooling the probes (193, 205). The simultaneous use of multiple (up to 45) probes under identical hybridization conditions in the checkerboard DNA-DNA hybridization assay leads to doubts about the accuracy of its performance. The sensitivity of the assay is not high, 103-104 bacterial cells are necessary for a positive identification (207).<br/>In 1988 Chuba, Göbel et al. introduced the 16S rRNA-directed oligonucleotide probes, to detect <em>P. gingivalis</em>, <em>P. intermedia</em> II, <em>P. assacharolytica</em>, and <em>A. actinomycetemcomitans</em> (208). The specificity of the probes was 100% and the detection limit using isotopical labeling was less than 5x103 organisms. Dix, Moncla et al. developed species-specific 16S rRNA-directed oligonucleotide probes for further periodontal species and demonstrated their higher specificity and sensitivity upon the genomic probes (209). The oligonucleotide probes are able to distinguish between closely related species which contain homologous sequences, for example, H. aphrophilus and <em>A. actinomycetemcomitans</em>. The whole-genomic probes failed to differentiate between these species (209). An additional advantage is the high detection sensitivity because the number of rRNA target molecules is larger, being at least 100 times greater than that of bacterial DNA targets (210). However, the isolation of nucleic acids plays a crucial role for maximum sensitivity of the DNA/RNA hybridization procedure (211). The oligonucleotide probes are suitable for specific detection of bacterial species in highly heterogeneous plaque samples. The short oligonucleotide probes complementary to hypervariable regions of 16S rRNA have been used frequently (172, 173, 176, 212-214).  </p>
            <p>The culture - independent molecular genetic method used in the present study was based upon the combination of PCR-amplification and dot-blot hybridization with species-specific 16S rDNA-directed oligonucleotide probes. The PCR-amplification was performed within the conserved region of 16S rDNA of bacterial cells using eubacterial primers. The amplification step increases the sensitivity of the detection method over the conventional nucleic acid hybridization. <br/>The issue of heterogeneity within a species was considered by the design of the probes. The appropriate target sequence had to have 100% homology to the sequences of all strains of a species deposited in a database (as of July 2002). Thorough control was considered crucial to ensure the quality of the hybridization results. Therefore, all probes were checked in dot-blot hybridization against a wide range of possible cross-reacting strains.<br/>Only the probe for <em>F. nucleatum</em> additionally detected a related species, <em>F. periodonticum</em>. This was also reported by Dix et al. (209) and Socransky et al. (215). Sequence homology of 16S rRNA between these two species is exceedingly high, 97.3% - 99.5% (178). <em>F. periodonticum</em> has been detected infrequently in periodontitis patients and healthy individuals, thus the role of that species is unclear (34, 216).</p>
            <p>
               <citenumber id="N112DB" start="40"/>With the described method it is possible to investigate large numbers of samples in a reasonable time. This allows comprehensive epidemiological studies of the subgingival microbiota in subjects with different clinical status. The methods used in the present study represent qualitative data. No quantification attempt has been undertaken.</p>
            <p>In several studies the quantitative detection of microorganisms has been performed. However, quantification in fact proves nothing more than the mere presence of a microorganism. It is obvious that the mean numbers of bacteria increase as the pocket depth progresses. Therefore, it is more informative to know the proportion of the target species in a total bacterial mass. It has long been known that there is a shift in the proportions of microorganisms in the flora as a site progresses from a healthy to a diseased state (217). The culture-based method and immunoassays are not adequate for the proportional estimation. The competitive PCR method has been used for  the quantification, however the amplification distorts the endpoint proportions of amplicons of target species (218). The recently developed real-time PCR assay has overcome the so-called "plateauing effect" by measuring the PCR-products throughout the reaction (165). Simultaneous PCR-amplification and hybridization by this method allows quantification of a single species and total number of bacterial cells in a sample using specific controls of known quantity. However, the exact copy number of 16S rRNA operons within each cell of the numerous species of oral bacteria has not been clarified and doubling time varies among bacterial species. This represents the major limitation to the absolute determination of bacterial numbers by real-time PCR based on the 16S rRNA gene sequence (197, 219). The requirement of expensive and sophisticated technology besides mentioned shortcomings in accuracy limits the application of this method as a routine clinical diagnostic tool.<br/>Generally, the evaluation of quantitative aspects is complicated by the fact that amounts of bacteria depend on the method of sampling, the number of samples taken in a subject, the site selection criteria, the method used to calculate counts based on sampling volumes and sample dilution, and the way mean counts are determined (physical vs. mathematical pooling of multiple samples) (52). <br/>Although different methods have been applied for the detection and quantification of periodontal bacteria in microbiological diagnosis, there is no single assay that has demonstrated ideal characteristics. <br/>Nevertheless, besides methodological differences, the study design i.e. site selection, and the number of samples taken in a subject, influences the microbiological results of the study (52).</p>
            <p>
               <link id="_Toc119564354"/>
            </p>
         </section>
         <section id="N112EF" label="6.2">
            <head>Epidemiological study</head>
            <subsection id="N112F4" label="6.2.1">
               <head>
                  <link id="_Toc119564355"/>
                  <em>Tannerella forsythensis</em>
               </head>
               <p>Initially, <em>Tannerella forsythensis</em> was thought to be a relatively uncommon subgingival species. The studies of Gmür et al. using monoclonal antibodies to enumerate the species directly in plaque samples suggested that the species was more common than previously found in culture-based studies (182). According to the extensive literature bacterial culture is considered inadequate for the detection of <em>T. forsythensis</em> (161, 192). Therefore, studies using this method will not be discussed here. </p>
               <p>
                  <citenumber id="N1130A" start="41"/>Recently, 16S rDNA sequence analysis confirmed that <em>T. forsythensis</em> (formerly <em>Bacteroides forsythus</em>) was not a species within the genus <em>Bacteroides</em> sensu stricto. A new genus, <em>Tannerella</em>, was proposed for <em>B. forsythus</em>, with one species, <em>Tannerella forsythensis</em> (220). Interestingly, the nearest genetic neighbour, oral clone BU063, has been associated with oral health (221). The oligonucleotide probe used in the present study is not complementary with that clone. It is conceivable that earlier studies mistakenly pooled several strains of <em>T. forsythensis</em> with different pathogenic potentials. </p>
               <p>In the current study <em>T. forsythensis</em> was one of the species with a high prevalence (96%) in patients with generalized aggressive periodontitis (Fig.1). Additionally, the patients showed high load of <em>T. forsythensis</em>, i.e. 73.3% of patients had all pockets sampled positive for this species (Fig.6). <em>T. forsythensis</em> could be detected significantly more often in periodontal pockets than in healthy control sites (88.6% and 34.1% respectively) (Fig.2). However, no significant differences in detection frequency between different pocket depths could be seen (Fig. 5). Gmür et al. using a quantitative approach could demonstrate that the levels of <em>T. forsythensis</em> were strongly related to increasing pocket depth (182). Young patients with aggressive periodontitis studied by Kamma et al. (170) revealed a similarly high prevalence of <em>T. forsythensis</em> (98.5%). In that investigation indirect immunofluorescence assay was used. The site prevalence (83% positive pockets) was in good agreement with our study. However, no control sites were sampled.<br/>In young adults with advanced periodontitis a high prevalence of <em>T. forsythensis</em> (60-70%) has been reported by using DNA probe approach (191, 206, 212). Similar results were obtained with a PCR-assay (11, 14).<br/>Studies with the aim of correlating clinical parameters and the presence of certain bacterial species concluded that <em>T. forsythensis</em> was positively correlated with the clinical signs of a disease and can be regarded as a risk indicator for attachment and bone loss (145, 146, 222). Persistence of <em>T. forsythensis</em> post-therapy and the subsequent deterioration of periodontal conditions suggests evidence for the species association with recurrent periodontitis (156). It has been shown that with the reduction of <em>T. forsythensis</em> below the detectable level clinical improvement was significant (151). However, clinical improvement is never a consequence of a reduction / elimination of single species.</p>
               <p>Choi et al. used a detection method similar to our study for the evaluation of the prevalence of <em>T. forsythensis</em> in patients with chronic periodontitis and in healthy persons (176). High prevalence (96.6%) was reported in chronic periodontitis patients. The prevalence was significantly lower in healthy persons. However, the comparison between the groups is unreliable because of incorrect statistics.</p>
               <p>
                  <citenumber id="N1134D" start="42"/>More sensitive microbiological tests have been of advantage for detecting <em>T. forsythensis</em> in healthy subjects. The current study particularly identifies <em>T. forsythensis</em> as a much more frequent member of the microflora of healthy sites than previously suspected on the basis of culture investigations. This contradicts the hypothesis that the mere presence of <em>T. forsythensis</em> may be taken as an indicator of active periodontal breakdown. <em>T. forsythensis</em> could be detected in 85.7% of the elderly (Fig.1). Almost half of the sampled sites in this patient group were positive (Fig.3). It has been reported that the colonization of supragingival plaque of healthy subjects, even in early childhood, is frequent (34, 35, 223-226). These data suggest the indigenous nature of <em>T. forsythensis</em>. However, in special periodontal / host conditions or specific proportional bacterial constellations <em>T. forsythensis</em> can induce periodontal breakdown. The presence of putative pathogens increases the risk of disease development. The presence of <em>T. forsythensis</em> has been especially correlated with attachment loss, increasing the risk by a factor of 2.45 - 5.3 (36, 145, 227). Even 8.16 times greater odds of attachment loss by presence of <em>T. forsythensis</em> has been reported in a longitudinal study (222). A significant increase in the proportions of <em>T. forsythensis</em> has been observed in sites with periodontal breakdown (182).<br/>Little information is available on the virulence of <em>T. forsythensis</em>. Beside the LPS and the production of a trypsine-like protease (228) its ability to penetrate host cells and to induce apoptosis has received attention (84, 229). Recently, a cysteine protease gene (prtH) has been identified (226). It was shown that 85% of <em>T. forsythensis</em> isolates from diseased sites revealed a prtH genotype, however only 10% of such strains could be detected in healthy sites. There is a need for more comprehensive research of the virulence and taxonomic variability of <em>T. forsythensis</em>. </p>
               <p>The evidence for associating <em>T. forsythensis</em> with severe periodontal disease has mainly been based on epidemiological data and evaluation of the correlation between the presence of the species and clinical conditions. <br/>The data of the present study support the evidence of <em>T. forsythensis</em> being a periodontopathogen. The species was significantly more frequently detected in periodontal pockets than in control sites of GAP patients (Fig. 2). Also, the significantly higher prevalence and load of <em>T. forsythensis</em> in GAP patients than in healthy elders (Fig. 3, 6) indicates its strong association with aggressive periodontitis in young adults.</p>
               <p>
                  <link id="_Toc119564356"/>
               </p>
            </subsection>
            <subsection id="N1138C" label="6.2.2">
               <head>
                  <em>Porphyromonas gingivalis</em>
               </head>
               <p>
                  <em>Porphyromonas gingivalis</em> is the most intensively investigated periodontal species. It has frequently been associated with severe periodontitis (10, 15, 31, 167, 230). The culture-based approach can be considered adequate for the detection of <em>P. gingivalis</em>, as was shown by Conrads through comparative analysis using DNA hybridization (193).<br/>The prevalence of <em>P. gingivalis</em> in the generalized aggressive periodontitis group was high, 63.6% in the present study (Fig.1). Interestingly, most of these positive subjects showed colonization with <em>P. gingivalis</em> in all sampled pockets (Fig.6). The species was significantly more frequently detected in periodontal pockets than in control sites (59.1% and 22.7%, respectively) (Fig. 2). The site-prevalence was significantly lower in the elderly group than in the GAP population (Fig.3). <em>Porphyromonas gingivalis</em> could hence be associated with the development of aggressive periodontitis. <br/>Loesche et al. recovered high proportions of <em>P. gingivalis</em> along with high proportions of spirochetes from one EOP patient group, so-called "type B" patients (13). This group resembles the GAP entity as derived from clinical descriptions. These patients had significantly higher proportions of <em>P. gingivalis</em> than in four other patient categories. Also Alabandar et al. associated <em>P. gingivalis</em> and <em>Treponema denticola</em> with more severe and progressive forms of EOP (230). Kamma et al. recovered more frequent and significantly higher proportions of <em>P. gingivalis</em> from deeper periodontal pockets as compared to shallow sites in RPP patients (15). Her recently published data obtained by using indirect immunofluorescence technique revealed higher detection frequency of <em>P. gingivalis</em> in aggressive periodontitis group than the results of our study (170). The subject prevalence was as high as 89.4%, and 80% of the sampled pockets were positive for <em>P. gingivalis</em>. <br/><em>P. gingivalis</em> has also been strongly associated with chronic periodontitis (176, 231, 232) and recurrent periodontitis (142). Several investigators have found a significant correlation between proportions of <em>P. gingivalis</em> and attachment loss (39, 137, 182, 233). </p>
               <p>
                  <citenumber id="N113C8" start="43"/>Contradictory data exists on the presence of <em>P. gingivalis</em> in healthy periodontal conditions. In the current study, a relatively high prevalence (62%) was observed in the elderly with no significant difference to the periodontitis group (Fig.1). However, only 32% of the sampled sites of elderly were positive (Fig. 3), showing infrequent colonization of <em>P. gingivalis</em> in the control group. The difference to the periodontitis group was highly significant (p&lt;0.0001). The species was rarely found in shallow sites (Fig.4). <br/>Healthy persons investigated by Tanner et al. were not colonized by <em>P. gingivalis</em> (36). This was proven by bacterial culture and checkerboard hybridization methods. Healthy subjects and the elderly investigated by Haffajee et al. showed very low site-prevalence of <em>P. gingivalis</em> (4% and 5% respectively) (34). Absence of <em>P. gingivalis</em> in pre-school children and students confirmed by PCR assay demonstrates that this bacterium is usually not part of the resident oral flora in young healthy people (201, 224). Other authors have found a prevalence of 10-30% in older healthy subjects (232, 234). It raises the question whether these individuals may carry different, possibly less-virulent strains of <em>P. gingivalis</em>, or does the host response determine the outcome?<br/>There is extensive evidence of the pathogenic nature of <em>P. gingivalis</em> (s. 1.2.6.). However, it is complicated to prove the relevance of the reported virulence factors in vivo. Additionally, it has been proven that virulence varies among strains. <em>P. gingivalis</em> is able to invade human gingival epithelial cells in vitro (76). In a mouse model different strains of <em>P. gingivalis</em> exhibited varying levels of invasiveness (235). Proteolytic enzymes have been suggested as a possible virulence factor. However, no differences in proteolytic enzyme production between invasive and non-invasive strains could be demonstrated (236).<br/>As yet it is unknown which virulence factor correlates with more virulent <em>P. gingivalis</em> strain. In animal studies, strains W 50 or W 83 were highly virulent. Various strain-typing approaches (RFLP, ribotyping, serotyping, multilocus enzyme electrophoresis) have been used to identify highly virulent genotypes and to correlate them with disease. As yet, there is still no convincing evidence to associate specific genetic clone clusters with periodontal disease and hence numerous <em>P. gingivalis</em> genotypes were associated with disease (234, 237). Several studies confirm that patients are usually colonized by a single, unique genotype, present in sites with different clinical status. (237, 238). Healthy subjects were likely to harbour several strains (234). <br/>Obviously, there are various virulence factors of <em>P. gingivalis</em> playing a role in the etiopathogenesis of periodontitis. Therefore, an attempt of epidemiological studies to detect virulent <em>P. gingivalis</em> strains by targeting only one suspected virulence gene is questionable.<br/>Currently it is not possible to associate any genotype with aggressive periodontal disease. <em>P. gingivalis</em> can hence be regarded as an opportunistic pathogen. This evidence is supported by the low prevalence of <em>P. gingivalis</em> in healthy adults. Under suitable yet unknown environmental / host conditions certain strains of <em>P. gingivalis</em> can multiply and express virulence factors inducing disease development. Frequent detection of <em>P. gingivalis</em> together with <em>T. forsythensis</em> in active/deep periodontal pockets supports the evidence that certain consortia are of particular importance in progressive disease. The present epidemiological data have confirmed a strong association of <em>T. forsythensis</em> and <em>P. gingivalis</em> with generalized aggressive periodontitis.</p>
               <p>
                  <link id="_Toc119564357"/>
               </p>
            </subsection>
            <subsection id="N11419" label="6.2.3">
               <head>
                  <em>Actinobacillus actinomycetemcomitans</em>
               </head>
               <p>
                  <em>Actinobacillus actinomycetemcomitans</em> is considered to be of major etiologic relevance in the localized form of aggressive periodontitis (LAP) (14, 26, 49, 50, 239). The role of <em>A. actinomycetemcomitans</em> in generalized aggressive periodontitis is still unclear. The study presented here showed a low prevalence of this species (36.4%) in GAP patients (Fig.1). However, in 11% of the patients <em>A. actinomycetemcomitans</em> was present in all sampled pockets (data not shown). Generally, the species was evenly distributed in periodontal pockets and shallow sites (Fig.2). There is no preferential niche in diseased sites (Fig.5). In patients with a high load of <em>A. actinomycetemcomitans</em> the species can play an important role (240). It cannot be ruled out that some of the GAP patients previously had the localized form of aggressive periodontitis.<br/>Kamma et al. (170) found a low prevalence (25%) of <em>A. actinomycetemcomitans</em> in patients with aggressive periodontitis, similarly to our results. Tanner et al. detected high proportions of <em>A. actinomycetemcomitans</em> in young adults with advanced disease (241). Older subjects with advanced disease did not harbour this organism. Similarly, older GAP patients investigated by Loesche et al. were negative for <em>A. actinomycetemcomitans</em> (13). Slots et al. observed that the prevalence of <em>A. actinomycetemcomitans</em> decreased significantly with age. The authors reported that 74.4% of the 15-24 year-age group were colonized by the microorganism compared to 38.7% of those 25-34 years of age (242). <br/>Van Winkelhoff et al. observed a negative association between <em>A. actinomycetemcomitans</em> and <em>Fusobacterium</em> spp. in subgingival plaque (243). The authors followed LJP patients and found that <em>A. actinomycetemcomitans</em> was not recovered after these patients reached middle-age and developed more widespread periodontal breakdown. It may be that fusobacteria possess the capability to inhibit the colonization of <em>A. actinomycetemcomitans</em> as the genus <em>Fusobacterium</em> emerges as a prominent taxon of generalized EOP (243). Similarly, in the study presented here <em>Fusobacterium</em> spp. showed a high site-prevalence (96.7%) and negative association with <em>A. actinomycetemcomitans</em>  (Table 2). <br/>There are, however, studies demonstrating a low prevalence of <em>A. actinomycetemcomitans</em> even in LJP patients (13, 244). Obviously, <em>A. actinomycetemcomitans</em> plays an important role in some cases of localized and generalized forms of aggressive periodontitis. The evidence of this association can be traced back to the virulence of the species, epidemiological data and correlation with improvement after treatment.<br/>Single clones of exceedingly high virulence may be implicated in etiopathogenesis of periodontitis. <em>A. actinomycetemcomitans</em> strains differ in their ability to produce leukotoxin. This exotoxin lyses polymorphonuclear leukocytes and macrophages (106). Highly leukotoxic strains produce 10-20 times more leukotoxin than other strains (245). Bueno et al. found that subjects harbouring <em>A. actinomycetemcomitans</em> with a 530-bp deletion in the leukotoxin promoter region were more likely to convert to LJP than subjects who had A.a.-variants containing the full-length leukotoxin promoter region (246). In addition to the predominant colonization of <em>A. actinomycetemcomitans</em> in younger patients, it has been observed that very young patients (mean age 12.7 y.) harboured highly toxic strains (245). Young adults (mean age 25.5 y.) were colonized by minimal toxic strains. However, since the strains without the 530-bp deletion have been recovered from LJP lesions as well (245), high leukotoxin production may not be a prerequisite for pathogenicity. No epidemiological study looking of the distribution of highly virulent strains has been performed with GAP patients.<br/><em>A. actinomycetemcomitans</em> strains also vary in their capability to invade epithelial cells (247). The failure of non-surgical therapy to effectively control <em>A. actinomycetemcomitans</em> from subgingival sites may stem from the ability of the organism to invade gingival tissue and thereby evade the effect of mechanical debridement and periodontal healing (248). Investigation of biofilm formation in a plaque-free-zone of the bottom of a pocket demonstrated no participation of <em>A. actinomycetemcomitans</em> (46).<br/>Studies evaluating the correlation between treatment outcome and the presence of bacteria in LJP and "severe periodontitis" found a clear association between the improvement of periodontal conditions and the elimination of <em>A. actinomycetemcomitans</em> (249, 250). The failure to eliminate the combination of <em>A. actinomycetemcomitans</em> and <em>T. forsythensis</em> resulted in attachment loss (151). These microorganisms have been detected frequently in refractory periodontal lesions (231). An exceedingly high proportion of subgingival <em>A. actinomycetemcomitans</em> in periodontal sites undergoing active breakdown gives substantial credence to the notion of it being a key bacterial pathogen in certain cases of LJP (231). In chronic periodontitis patients the microorganism was not found to be related to an increased risk of disease recurrence (137).</p>
               <p>Healthy elderly individuals in our study showed a very low prevalence (9.5%) of <em>A. actinomycetemcomitans</em> (Fig.1, 3), demonstrating that the species is not a common colonizer in healthy periodontal conditions. This is in agreement with other reports about healthy individuals (34, 176, 231). Healthy children were shown to be negative for <em>A. actinomycetemcomitans</em> by PCR (201, 251). Even patients with chronic periodontitis are seldom colonized with this species (34, 192). Gmür et al. studied dental hygienists and observed a prevalence of 33% in supragingival plaque in spite of their better than average personal plaque control. However, the detected cell numbers were &lt;1% of the sampled microbiota (35). <em>A. actinomycetemcomitans</em> has also been found in tongue and saliva samples, even without subgingival colonization (252).<br/>The strains identified in healthy subjects or patients with chronic periodontitis were shown to be minimal leukotoxic strains(245). <br/>Chronic periodontitis patients investigated within the comprehensive epidemiological study with the identical methods described here showed a site-prevalence of only 7% (Dr. Moter, personal communication). Interestingly, Choi et al. could detect this organism in almost 90% of chronic periodontitis patients in a Korean population using a similar detection method (176). The high prevalence can be explained by ethnic, immunological, nutritional factors.<br/>Apparently, <em>A. actinomycetemcomitans</em> (probably special strains) can be regarded as etiologically relevant in aggressive periodontal disease in young adults, however, the evidence is not as strong as for the localized form (14, 230, 239, 240, 253).</p>
               <p>
                  <link id="_Toc119564358"/>
               </p>
            </subsection>
            <subsection id="N1149C" label="6.2.4">
               <head>
                  <em>Campylobacter rectus</em>
               </head>
               <p>
                  <citenumber id="N114A6" start="44"/>
                  <em>Campylobacter rectus</em> could be detected in more than half of the GAP patients; however, only 31.8% of the pockets were positive (Fig.1,2). Still a significant difference was observed in the colonization pattern of periodontal pockets and control sites in the study population (Fig. 2). When compared to the occurrence in the healthy elderly group a highly significant difference could be seen in site-prevalence (Fig. 3). The species could be rarely detected in healthy population (prevalence 23.8%) (Fig.1). <br/>High levels of <em>C. rectus</em>, especially when found together with <em>T. forsythensis</em> have been related to an increased risk of disease progression (31, 33, 36, 39, 137, 138, 254). The highest association among all organisms in the current study was observed for these two species (Table 2). <br/>Kamma et al. recovered <em>C. rectus</em> exclusively in the deep pockets of GAP patients (15). The microorganism has been seen predominately in the middle and deep pocket zones forming large clumps when examined by scanning immunoelectron microscopy (46). <em>C. rectus</em> may advance to the most apical border of plaque area by the use of its motility and associate with biofilm formation in the plaque-free-zone and with disease progression. <br/>The high prevalence of <em>C. rectus</em> in aggressive periodontitis patients has been reported in the literature in contrast to low detection in healthy populations (14, 15, 30, 170, 255). The data of Gmür et al. confirm that supragingival plaque is a natural habitat for <em>C. rectus</em> in periodontally healthy persons with good oral hygiene (35, 225). The species could be identified in 48% of the investigated subjects using an immunoassay. Between the elderly and the healthy control group no difference was seen (34). <em>C. rectus</em> was identified in less than 20% of the subgingival samples. The site-prevalence was not higher in patients with chronic periodontitis (19.3%) (Dr. Moter, personal communication).<br/>Patients with aggressive periodontitis showed significantly higher and more frequent elevation of serum IgG antibody to this organism as compared to chronic periodontitis patients or healthy controls (256). <br/><em>C. rectus</em> may be considered as a putative pathogen that occasionally, probably in constellation with <em>T. forsythensis</em>, contributes to the development of aggressive periodontitis. It may need to exceed relatively high critical threshold values in the subgingival flora to lead to a progression of the disease (257).</p>
               <p>
                  <link id="_Toc119564359"/>
               </p>
            </subsection>
            <subsection id="N114D8" label="6.2.5">
               <head>
                  <em>Fusobacterium nucleatum</em>
               </head>
               <p>According to the literature <em>Fusobacterium nucleatum</em> is the most commonly isolated organism in subgingival samples, especially in deep periodontal pockets. It has often been recovered in high proportions in different patient groups (10, 31, 33, 241).<br/>The data of the present study suggest a strong association of <em>F. nucleatum</em> with GAP. The species was present in 91% of the GAP patients (Fig.1) and significantly more frequently in periodontal pockets than in shallow sites (Fig. 2). All 4 sampled pockets were positive for this organism in half of the patients (Fig.6). The load in the elderly subjects was significantly lower. The site-prevalence in the elderly was only 25% (Fig. 3). Haffajee et al. in contrast, identified <em>F. nucleatum</em> ss. polymorphum in 58% of the sites of the elderly subjects using checkerboard hybridization method (34).<br/>It is however, difficult to interpret the role of <em>F. nucleatum</em> from our data, as the probe simultaneously detected F. periodonticum. There are reports of F. periodonticum being a frequent colonizer of the supra- and subgingival plaque of healthy individuals and periodontitis patients (30). <br/>Furthermore, the phenotypic and genetic heterogeneity of <em>F. nucleatum</em> has led to an attempt to classify the strains into taxonomically relevant groups, such as subspecies, but these efforts have not resulted in a widely accepted taxonomy (258). Within the species <em>F. nucleatum</em>, a number of investigators have identified a range of distinct genetic clusters which have subsequently been designated as subspecies. Unfortunately the results often do not correlate with each other. Morris et al. could demonstrate that the species <em>F. nucleatum</em> consists of at least three distinct species (186). There is a need for revision of the previously designated genetic divisions as well as phenotypic characterization of <em>F. nucleatum</em> and genus <em>Fusobacterium</em> as a whole. <br/>Therefore, no differentiation between the subspecies was undertaken in the present study.<br/>Loesche et al. did not associate <em>F. nucleatum</em> with GEOP, because the species formed only ca. 3% of the total bacterial count (13). In the study of Kamma et al. <em>F. nucleatum</em> was detected most often in the medium and deep lesions of GAP patients (15). Chronic periodontitis patients exhibited high prevalence of <em>F. nucleatum</em> (204). A prevalence of 81.3% was observed in the reported epidemiological study (Dr. Moter, personal communication).<br/>The adherence factors of <em>F. nucleatum</em> have been attributed to the potential pathogenicity of certain strains, however, no correlation could be established between any particular subspecies (259). <em>F. nucleatum</em> could not be detected in the plaque-free zone at the bottom of periodontal pockets suggesting that this microorganism does not primarily participate in the apical progression of plaque (46). The species was usually located in the middle and deep pocket zones in an unattached plaque area.<br/><em>F. nucleatum</em> has been implicated in disease progression, as significantly higher proportions were detected in active lesions than in inactive sites (39, 140).<br/>Our data provide evidence that <em>F. nucleatum</em> might be associated with aggressive periodontitis. The species is only infrequently detected in healthy subjects (Fig.1, 3).</p>
               <p>
                  <link id="_Toc119564360"/>
               </p>
            </subsection>
            <subsection id="N11529" label="6.2.6">
               <head>
                  <em>Prevotella intermedia</em>
               </head>
               <p>Contradictory reports exist about <em>Prevotella intermedia</em>. This microorganism has been found in high proportions in adults with moderate to severe periodontal breakdown and in EOP patients (13, 183). At the same time, a high prevalence has been reported in treated and maintained patients, in some of them in high proportions (13). Colonization of <em>P. intermedia</em>  in children has also been observed (201, 224).<br/>Recently, strains of <em>Bacteroides intermedius</em> with similar phenotypic traits have been classified into two species, <em>Prevotella intermedia</em> and <em>Prevotella nigrescens</em>. This distinction makes earlier studies on these organisms difficult to interpret, since data from two different species may have been inadvertently pooled (260). It has been reported that <em>P. intermedia</em> is associated with periodontitis, whereas <em>P. nigrescens</em> is a natural inhabitant of the gingival sulcus and the supragingival plaque (35, 40, 201, 261).<br/>In the present study no clear association for <em>P. intermedia</em> with GAP or periodontal health was found. There was no significant difference in subject-based prevalence and load of <em>P. intermedia</em> between the groups (Fig.1, 6). The species was more often detected in the pockets of GAP patients than in the control sites (Fig. 2), and when compared to the positive sites of elderly (Fig. 3). The difference however, was always only moderately significant (p&lt;0.05). <br/>Mullally et al. (14) associated <em>P. intermedia</em> with GEOP because of its high prevalence (58.8%), which is lower than in our study. However, no control group was included in the study, reducing the relevance of the results. <br/>Kamma et al. (15) found no difference in the detection frequency of <em>P. intermedia</em> between shallow sites and deep pockets, however, the proportions were significantly higher in deep pockets.<br/>Earlier studies using unreliable "predominant cultivable microbiota" method recovered higher proportions of <em>P. intermedia</em> in active sites when compared to inactive sites, however, without significant difference (39). <br/>Concerning the probable differences in virulence of <em>P. intermedia</em> clones no correlation could be found since the same genotypes were found at both diseased and non-diseased sites (237).<br/>Choi et al. reported a high prevalence of <em>P. intermedia</em> (90%) in patients with chronic periodontitis and significantly lower in healthy subjects (only 5%) in a Korean population (176). <br/>The data of the elderly group in our study revealed frequent detection of the species in well-maintained subjects (prevalence 66.7%) (Fig.1) incriminating <em>P. intermedia</em> as a common colonizer of the oral cavity in healthy oral conditions. Conrads et al. (201) found <em>P. intermedia</em> very frequently in plaque samples from children with PCR detection assay. </p>
               <p>
                  <citenumber id="N11576" start="45"/>However, contradictory results have been gained. Molecular genetic analysis revealed no significant difference in site-prevalence between healthy, elderly and chronic periodontitis groups (34). Interestingly, despite more frequent supra- and subgingival colonization of <em>P. intermedia</em> in periodontitis patients than in healthy persons, the quantitative assessment showed no significant difference in proportions (30). <br/>Although in some studies the etiologic role of <em>P. intermedia</em> in periodontitis was considered to be high (11, 13, 30, 230), a relatively low risk (1.6) for periodontal breakdown in the presence of <em>P. intermedia</em> has been reported (48). It seems that higher mean counts of <em>P. intermedia</em> than for <em>P. gingivalis</em> are needed for the progression of the disease. Rams et al. assessed the relative risk for periodontal breakdown with respect to the proportions of certain species and found that much higher proportions of <em>P. intermedia</em> are needed to reach a 2.5 relative risk for periodontitis recurrence when compared to other putative pathogens (233). Analysis of the humoral host response against <em>P. intermedia</em> has shown similar antibody levels in individuals with and without periodontal disease (262). This lack of association with periodontal disease could be explained in part by the frequent colonization of <em>P. intermedia</em> in locations other than periodontal pockets (183).<br/>It is difficult to evaluate the role of <em>P. intermedia</em> given the variable and contradictory literature. Our data incriminates this organism as one of moderate importance in GAP patients, but it is obviously not a key putative pathogen. The majority of data implicates <em>P. intermedia</em> as a common part of oral microflora in healthy persons. According to the literature an increase of its proportions is considered critical in etiopathogenesis of periodontal disease.</p>
               <p>
                  <link id="_Toc119564361"/>
               </p>
            </subsection>
            <subsection id="N115A3" label="6.2.7">
               <head>
                  <em>Eikenella corrodens</em>
               </head>
               <p>Since <em>Eikenella corrodens</em> has been suggested in earlier research as a pathogen because of its assotiation with initiation and progression of the disease in juvenile and refractory cases (49, 241, 263, 264), it was of interest to compare its distribution in GAP patients and the elderly. <em>E. corrodens</em> was more frequently identified in GAP patients than in elderly subjects (Fig.1, 3, 6). In the majority of the elderly only one sampled site was positive for <em>E. corrodens</em> (Fig.6). Interestingly, no significant difference was found between the number of colonized pockets and control sites in the diseased group (Fig.2). <em>E. corrodens</em> tends to colonize GAP patients, probably when the environmental conditions become favorable. It is questionable whether it plays a role in disease progression.<br/>The results are consistent with the data of Kamma et al. who could not find significant qualitative and quantitative difference between colonization of deep pockets and shallow sites by <em>E. corrodens</em> in RPP patients either (15). Albandar et al. detected this species in 91% of EOP patients and in 89% of subjects without disease (230). Similar relations between chronic periodontitis and health has been observed frequently (11, 34, 36). The level of this bacterium seems to be independent of disease classification or the rate of progression.<br/>In conclusion, <em>E. corrodens</em> is a commensal species that does not play a significant role as a primary opportunistic periodontal pathogen.</p>
               <p>
                  <link id="_Toc119564362"/>
               </p>
            </subsection>
            <subsection id="N115CB" label="6.2.8">
               <head>
                  <em>Veillonella parvula</em>
               </head>
               <p>
                  <em>Veillonella parvula</em> was an infrequently detected species in the GAP and elderly groups, with a prevalence of 25% and 43%, respectively (Fig. 1). No significant difference in detection frequency between the two groups (Fig. 1, 3) or between diseased and healthy sites in periodontitis patients could be demonstrated (Fig. 2, 5). This is in accord with the results of Kamma et al. that revealed a similar presence of this bacterium in shallow and deep sites (53% and 33%, respectively) of RPP patients, however, as comparison to our study with a much higher site-prevalence (15).<br/>Studies of experimental gingivitis included <em>V. parvula</em> in the group of species which increased in proportion as inflammation developed (23). However, a majority of publications show only a weak association between periodontitis and this microorganism (39, 140). <em>V. parvula</em> together with <em>E. corrodens</em> and <em>Capnocytophaga</em> spp. was shown to be a common member of microbiota in subgingival sites of diseased and healthy subjects and was detected in similar proportions in both groups (36, 217). <em>V. parvula</em> has been detected more frequently in inactive sites when compared to active sites (39, 137, 140). Haffajee et al. showed the site-prevalence of <em>V. parvula</em> in the elderly (60%) being higher than in the younger healthy group (48%), however without significant difference (34). Low detection frequency of the species in our study raises the question of the accuracy of the performed identification. Low sensitivity of the oligonucleotide probe cannot be ruled out. <br/>Results of our study suggest that <em>V. parvula</em> should not be regarded as an adequate marker of healthy flora.</p>
               <p>
                  <link id="_Toc119564363"/>
               </p>
            </subsection>
            <subsection id="N115F9" label="6.2.9">
               <head>
                  <em>Capnocytophaga ochracea</em>
               </head>
               <p>
                  <citenumber id="N11603" start="46"/>The prevalence of <em>Capnocytophaga ochracea</em> in the GAP patients of the current study was distinctly lower (16%) than of the elderly (95%) (Fig. 1). As few as 3% of the pockets of the GAP subjects were positive, in contrast 55% of the sites of the elderly demonstrated colonization by <em>C. ochracea</em> (Fig. 3). The differences were highly significant. Even the shallow sites of GAP patients were rarely colonized, while 70% of the 1-3 mm sites of the elderly were positive (Fig. 4). Interestingly, patients with aggressive periodontitis exhibited seldom <em>C. ochracea</em> in subgingival plaque.<br/>Frequent detection of <em>C. ochracea</em> in gingival sulci of children by Conrads et al. was interpreted as a physiological condition (201).<br/>Increased levels of the species appeared to be consistent with a decreasing risk of new attachment loss. Similarly lower levels were found prior to breakdown (36, 137, 140, 265).<br/>In several studies, contradictory to our results, <em>C. ochracea</em> tends to be a common colonizer in bacterial plaque regardless of whether the samples were obtained from supra-or subgingival plaque of diseased or healthy subjects, from active or inactive sites (15, 30, 34, 39). In some medical case reports <em>C. ochracea</em> has been made responsible for endocarditis and cervical abscess (266). Tanner et al. in earlier research has associated <em>C. ochracea</em> with juvenile periodontitis as high proportions of the species were recovered from diseased sites in young adults (241). Our data clearly confirm the association of <em>C. ochracea</em> with periodontal health. The use of this species may be a good indicator for periodontal health.</p>
               <p>
                  <link id="_Toc119564364"/>
               </p>
            </subsection>
            <subsection id="N1162C" label="6.2.10">
               <head>Colonization of healthy sites</head>
               <p>The comparison of the microflora of shallow sites from GAP patients with the flora from subjects with healthy periodontium can give valuable information as to whether microorganisms originate from the adjacent pockets as a consequence of a "spill over", or belong to the resident microflora. Both hypotheses are presented in literature (267). Riviere et al. tested the hypothesis that certain bacteria at healthy sites would be detected more frequently in subjects with periodontitis than in subjects without periodontitis (255). Using an immunological assay he could show statistically significant differences only for <em>P. gingivalis</em> and <em>Treponema</em> spp. The data reported by Ximenez-Fyvie et al. support Riviere's hypothesis (30). The authors obtained quantitative data using checkerboard hybridization with whole-genomic probes. Higher mean counts of periodontitis-associated bacteria were observed in shallow sites of periodontitis patients when compared to healthy subjects. Similarly Haffajee et al. using the same detection method showed that <em>T. forsythensis</em>, <em>P. gingivalis, T. denticola</em> and <em>Selenomonas noxia</em> were found more frequently, and at higher levels, in shallow pockets of periodontitis subjects than at similar sites in the healthy group (34). The data of the present study contradicts this hypothesis. We found no significant difference between the groups for any species, except for <em>C. ochracea</em>, in colonization of shallow sites (Fig. 4). The results suggest rather that the putative periodontopathogens belong to a resident flora. Thus, the mere presence of a putative pathogen has limited value as an adjunct to clinical diagnosis and treatment planning. However, the risk that the disease may occur at these sites is highly dependent on the host, as well as the variation in bacterial virulence.</p>
               <p>
                  <link id="_Toc119564365"/>
               </p>
            </subsection>
            <subsection id="N1164D" label="6.2.11">
               <head>Bacterial consortia</head>
               <p>"Profiles" of microbial complexes have been recognized upon clustering of the detected species from distinct clinical conditions (140, 177). A high degree of association between organisms may indicate a symbiotic relationship in periodontal pockets. A pathogen may more readily colonize subgingival sites already occupied by other organisms, due to gingival inflammation or growth factors produced by other organisms. However, some organisms may occur together in periodontitis lesions merely because they both induce destructive disease without interacting with each other. Putative pathogens acting together may produce additive or even synergistic damage to the periodontal tissues. Therefore a therapeutic regimen leading to concomitant suppression or elimination of symbiotic microorganims may achieve particularly great clinical benefits. <br/>The definition of five subgingival plaque bacterial complexes by Socransky et al. (215) was based on the analysis of the microbial community of over 13,000 plaque samples from 185 subjects (EOP patients excluded) by using whole-genomic DNA probes in checkerboard hybridization assays. 5 clusters were formed: </p>
               <p>
                  <citenumber id="N11659" start="47"/>
                  <ol numbering="arabic">
                     <li>
                        <p>Red cluster - <em>P. gingivalis</em>, <em>T. forsythensis</em>, <em>T. denticola</em>
                        </p>
                     </li>
                     <li>
                        <p>Orange cluster - <em>F. nucleatum</em>, <em>P. intermedia</em>, <em>P. nigrescens, Peptostreptococcus micros, Campylobacter</em> spp., <em>E. nodatum, S. constellatus</em>
                        </p>
                     </li>
                     <li>
                        <p>Green cluster - <em>Capnocytophaga </em>spp<em>., Campylobacter concisus</em>, <em>Eikenella corrodens</em>, <em>A. actinomycetemcomitans</em> serotype a</p>
                     </li>
                     <li>
                        <p>Yellow cluster - <em>Streptococcus</em> spp.</p>
                     </li>
                     <li>
                        <p>Purple cluster - <em>Actinomyces odontolyticus</em>, <em>Veillonella parvula</em>
                        </p>
                     </li>
                  </ol>
               </p>
               <p>The members of the red complex have frequently been detected together and exhibit a very strong correlation with pocket depth (215). The biological basis of the association among these species is not known. However, strong interspecies adherence has been demonstrated among these putative pathogens (268).<br/>The co-existence of <em>T. forsythensis</em> and <em>P. gingivalis</em> has been frequently reported (11, 151, 177, 182, 192, 215, 223). Slots et al. (269) showed an odds ratio of 18.6. It has been speculated that <em>T. forsythensis</em> precedes the colonization by <em>P. gingivalis</em>, since <em>T. forsythensis</em> alone is detected more frequently (182, 191). The data of the present study are consistent with this report. <em>P. gingivalis</em> was detected alone in only 4 samples. The odds ratio of detecting these species together was 23.5. Since <em>T. forsythensis</em> and <em>P. gingivalis</em> were strongly associated with GAP, a co-infection with both microorganisms may lead to a particularly aggressive form of periodontal disease. </p>
               <p>The red complex was shown to be closely associated with the orange cluster (215). The odds ratios of the present study show mutual relationships among the species belonging to these 2 complexes. <em>T. forsythensis</em> and <em>C. rectus</em> were most frequently detected together in periodontal pockets (OR 35.6). Colonization by these two bacterial species has often been associated with the induction of a shift from periodontal health to disease (17, 31, 33, 36, 39, 48, 144, 254). Similarly to our results Kamma et al. (170) observed the strongest positive association between <em>T. forsythensis</em> and <em>C. rectus</em> (OR 109.5).<br/>The statistical analysis of Haffajee et al. revealed that combinations of species are better predictors of new attachment loss. Significantly higher levels of <em>T. forsythensis</em> and <em>C. rectus</em>, and significantly lower levels of <em>C. ochracea</em> were found in active subjects prior to breakdown (265).</p>
               <p>
                  <citenumber id="N116E2" start="48"/>
                  <em>T. forsythensis</em> is often detected together with <em>F. nucleatum</em> (36, 223). In culture <em>F. nucleatum</em> enhances the growth of <em>T. forsythensis</em> (228). These species were frequently identified in the same pockets (OR 9.1) (Table 2). The species mentioned, together with <em>C. rectus</em>, have often been found in sites which exhibited active disease and those which responded poorly to therapy (140).<br/>Mullally et al. demonstrated a strong association between <em>P. intermedia</em> and <em>E. corrodens</em> in EOP patients (14). This constellation however could not be confirmed in our study. Rather <em>E. corrodens</em> was associated with <em>A. actinomycetemcomitans</em> (OR 5.8) (Table 2). According to Socransky et al. they both belong to a green cluster (215). This pair has frequently been identified in lesions of LJP (33, 49).<br/>Ashimoto et al. found positive associations between <em>C. rectus</em> and <em>E. corrodens</em>, as well between <em>P. gingivalis</em> and <em>E. corrodens</em> when investigating heterogeneous patient groups (11). Our results and those of Socransky et al. (177) indicated a negative association between these species. The evaluation of heterogeneous population groups and the use of different detection methods may explain these discrepancies to some extent.</p>
               <p>
                  <link id="_Toc119564366"/>
               </p>
            </subsection>
         </section>
         <section id="N11719" label="6.3">
            <head>Additional species associated with periodontitis</head>
            <p>The present investigation of the microbial profile of aggressive periodontitis was confined to a few putative pathogens which have earlier been associated with etiopathogenesis of the disease. However, the disease process is related to a complex microbiota, where a large, still undefined number of microorganisms might play a role. <br/>With the advent of molecular biology, especially the utilization of 16S rRNA molecule, it has become available to study mixed bacterial communities in their entirety. Research has revealed that about 50% of the oral flora is unculturable, certainly including novel pathogens (270). The analysis of 2,522 clones obtained from the sites with various periodontal conditions by Paster et al., revealed an unexpected diversity (19). About 60% of the clones fell into known species and 215 novel phylotypes were identified. Associations with chronic periodontitis and healthy periodontium were observed for several new species and phylotypes by Kumar et al. (271). Several uncultivated phylotypes showed a very strong relationship to disease, suggesting that there may be previously unrecognized organisms that play an important role in the pathogenesis of periodontitis.<br/>Spirochetes, an example of as yet uncultivated bacteria, have been found in subgingival plaque samples of periodontitis patients at high frequencies. Their role in the pathogenesis of periodontal diseases is less clear, due to the difficulties of culturing them in vitro. Along with dark-field microscopy results, culture-independent techniques have shown an association of treponemes with the severity of periodontal disease and provided strong evidence for a particular role in patients with aggressive disease (17, 168, 230, 290).<br/>The investigation of subgingival samples of the RPP population (identical with the present study) has revealed great discrepancies between the prevalence of cultivable and hitherto uncultivable treponemal species (168). <em>Treponema denticola</em>, a cultivable species, was identified in only 40% of the samples, whereas the as yet uncultured group II treponemes was present in 72% of the pockets. Group IV treponemes were found in each patient and in 97.5% of the samples. The in situ hybridization results indicated that these organisms were present in high proportions and thus are part of the predominant flora (168). <br/>Several other microbial species and genera have been implicated to be associated with destructive periodontal diseases. These include <em>Micromonas micros</em> (formerly <em>Peptostreptococcus micros</em>), <em>Selenomonas</em> spp., <em>Eubacterium</em> spp., <em>Streptococcus intermedius,</em> enteric rods, pseudomonads (17, 18). <br/>Recently, the role of viruses has been discovered. Various herpesviruses, human cytomegalovirus (HCMV) and Epstein-Barr virus type-1 (EBV-1) have been detected in subgingival samples from patients with aggressive periodontitis (58, 272, 273). The virus-infected inflammatory cells can reduce host defense mechanisms, giving periodontopathic bacteria the opportunity to overgrow in the subgingival area and to invade tissues and cells more efficiently (272).<br/>Kumar et al. (271) reported about associations of new species and phylotypes with chronic periodontitis, including uncultivated clones from the <em>Deferribacteres</em> and <em>Bacteroidetes</em> phylum, <em>Megasphaera </em>clone BB166 and the named species <em>Eubacterium saphenum</em>, <em>Porphyromonas endodontalis, Prevotella denticola</em>, and <em>Cryptobacterium curtum</em>.<br/>The microbial diversity involved in periodontitis has become more complex than previously thought. In the future, a reevaluation of the present knowledge about the composition and mutual associations of the oral microflora in disease and health may be necessary.</p>
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         </section>
         <section id="N1175A" label="6.4">
            <head>Host factors</head>
            <p>Remarkable improvements in understanding the microbial / host interactions, intrinsic host defense ability, evaluation of individual immune responsiveness and susceptibility to infectious diseases have been made in recent years. It has been suggested that patients with a genetic predisposition to an altered level of inflammatory response may be less capable of tolerating the presence of putative pathogens, thereby putting certain patients at higher risk of periodontitis (148). There is evidence for specific hyper-inflammatory traits present in patients affected with severe periodontitis (274). Specific immune response results in much greater destruction in periodontal tissues. Aggressive periodontitis aggregates in families, suggesting that genetic variations in host responses play an important role in disease susceptibility (275). Also studies in twins showed that a significant part of the variance in clinical parameters of periodontitis may be attributable to genetic factors (276).<br/>Aggressive periodontitis patients represent susceptible hosts for periodontal disease, in which various host risk factors may be amplified. A recent comprehensive study aiming to define a characteristic immunological profile of different disease entities failed to explain the pathogenesis of aggressive periodontitis based on a single host risk factor (277). A wide heterogeneity was observed even in subgroups. The association of host immunological risk factors in patients with aggressive periodontitis is widely varied and more complex than previously thought. <br/>Recent evidence has indicated that patients with severe periodontitis have a perturbation of their systemic inflammatory status manifested by increased local and systemic levels of IL-1, IL-6, IL-8, TNF- , C-reactive protein, fibrinogen and moderate leukocytosis when compared to unaffected control groups (133, 278, 279, 280).<br/>Immunohistochemical and in-situ hybridization research showed enhanced accumulation of PMNs in gingival specimens of aggressive periodontitis patients, which is associated with the upregulation of IL-8, ICAM-1, IL-1  and TNF-  expression (281). Beside the hyperreactivity of PMNs, dysfunctions, mainly depressed chemotaxis and phagocytosis in patients with aggressive periodontitis has been demonstrated (277). </p>
            <p>
               <citenumber id="N1176A" start="49"/>Data on antibody responses in severe periodontitis patients are, however, inconsistent. In periodontitis patients the levels of antigen-specific serum antibodies are usually elevated (277). Alabander et al. found that patients with generalized aggressive periodontitis and very high levels of anti-LPS IgG had significantly less attachment loss than similar patients with lower levels of these antibodies (282). However, depressed antibody response against bacterial species has been observed in aggressive periodontitis cases, probably indicating high-risk subjects (277). <br/>A major portion of antibody to periodontitis-associated bacteria form the IgG2-subclass (109). It has been shown that the production of IgG2 predominates over IgG1 concentration by patients with early-onset periodontitis (128). It suggests that the functionally less-effective IgG2 plays an important role in susceptibility and dimension of periodontal destruction in those patients.<br/>Also, lower percentages of pan T, suppressor/cytotoxic T cells, and pan B cells have been found in some patients with aggressive periodontitis (277, 283).<br/>Gene polymorphisms have been acknowledged as genetic mechanisms by which some individuals, if challenged by bacterial accumulations, may have a more vigorous immuno-inflammatory response leading to more severe periodontitis. Kornman et al. (284) showed the association between severity of periodontitis and carriage of a composite genotype that included allele 2 of the IL-1  -889 and IL-1  +3953. Functionally the IL-1 genotype is associated with high levels of IL-1 production. The IL-1 gene polymorphism has been regarded as a genetic marker for increased susceptibility for aggressive periodontitis (285). However, inconsistent results have been reported. A study of a Brazilian family with aggressive periodontitis showed a lack of relationship between the genetic parameter and disease susceptibility discussed above (169). <br/>Recently a gene-environmental interaction between smoking and the IL-1 genetic polymorphism has been shown (132). Smokers bearing the genotype-positive IL-1 allele combination have an increased risk of periodontitis. The authors stated that the IL-1 genotype has no influence on non-smokers.</p>
            <p>Genetic polymorphisms in human TLR genes have been associated with physiologically important traits. Recently, two common cosegregating missense mutations, Asp299Gly and Thr399Ile, affecting the extracellular domain of the TLR4 protein have been characterized (115). Both mutations lead to an impaired efficacy of LPS signaling and reduced capacity to elicit inflammation. Consistently, a significantly increased risk for gram-negative infections was found for individuals carrying these mutations (286). However, not all the subjects who were hyporesponsive to LPS had the polymorphisms in TLR4 gene. And as well, not everyone with the TLR4 mutations was hyporesponsive to inhaled LPS (287). This suggests high complexity of the involvement of genes in host response. Interestingly, various mutations of the TLR2 and TLR4 genes could not be associated with chronic periodontitis so far (288). Further investigations with patients with aggressive periodontitis are necessary.</p>
            <p>Rapid development in automated high-throughput genetic assay techniques and databases allows large-scale investigation of genotypes and to determine single-nucleotide polymorphisms (SNPs). An Increasing number of possible genetic risk factors for severe periodontitis has been reported, like single nucleotide polymorphisms in genes of IL-10, Fc- , TNF-receptor-associated factor-1, CD14, etc. (110, 289). As the research is mostly based on statistical comparison of genotypes between healthy subjects and patients with severe periodontitis, the translation of these observations into reproducible genotype-phenotype associations stays limited. So far the suggested SNPs cannot be regarded as true susceptibility indicators for aggressive periodontitis.</p>
            <p>
               <citenumber id="N1177E" start="50"/>In conclusion, several defects within the immune system could act separately or synergistically, creating a dysfunctional inflammatory response that disables the protective mechanisms of the host, increasing host susceptibility to periodontal disease. It still needs to be clarified to what extent the microbiological factors influence the progression of the disease. It is evident that bacteria are necessary to initiate the disease, but the genetic background of the host appears to have much higher modifying impact than thought before.</p>
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