<?xml version="1.0" encoding="ISO-8859-1"?><cms:container xmlns:cms="http://edoc.hu-berlin.de/diml/module/cms"><cms:document><cms:meta><cms:entry id="front" part="front" ref="front" type="front"/><cms:entry type="title">GENOME-WIDE SCREENING OF LOSS OF HETEROZYGOSITY IN HUMAN MIDGUT CARCINOID TUMORS WITH FLUORESCENT TECHNIQUE</cms:entry><cms:entry type="author">Ruth Mari Caroline Löllgen</cms:entry><cms:entry id="N10097" part="N10097" ref="N10097" type="preface">
				Vorwort</cms:entry><cms:entry id="N1009B" part="N10097" ref="N1009B" type="pagenumber">8</cms:entry><cms:entry id="N100C3" part="N10097" ref="N100C3" type="pagenumber">9</cms:entry><cms:entry id="chapter1" part="chapter1" ref="chapter1" type="chapter">1.</cms:entry><cms:entry id="N100CE" part="chapter1" ref="N100CE" type="section">1.1.</cms:entry><cms:entry id="N100D7" part="chapter1" ref="N100D7" type="section">1.2.</cms:entry><cms:entry id="N100E0" part="chapter1" ref="N100E0" type="section">1.3.</cms:entry><cms:entry id="N100F2" part="chapter1" ref="N100F2" type="section">1.4.</cms:entry><cms:entry id="chapter2" part="chapter2" ref="chapter2" type="chapter">2.</cms:entry><cms:entry id="N10102" part="chapter2" ref="N10102" type="pagenumber">10</cms:entry><cms:entry id="N10107" part="chapter2" ref="N10107" type="section">2.1.</cms:entry><cms:entry id="N10119" part="chapter2" ref="N10119" type="section">2.2.</cms:entry><cms:entry id="N10128" part="chapter2" ref="N10128" type="section">2.3.</cms:entry><cms:entry id="N10143" part="chapter2" ref="N10143" type="section">2.4.</cms:entry><cms:entry id="chapter3" part="chapter3" ref="chapter3" type="chapter">3.</cms:entry><cms:entry id="N10154" part="chapter3" ref="N10154" type="pagenumber">11</cms:entry><cms:entry id="N1015F" part="chapter3" ref="N1015F" type="section">3.1.</cms:entry><cms:entry id="N1016B" part="chapter3" ref="N1016B" type="pagenumber">12</cms:entry><cms:entry id="N1018B" part="chapter3" ref="N1018B" type="pagenumber">13</cms:entry><cms:entry id="N10190" part="chapter3" ref="N10190" type="subsection">3.1.1.</cms:entry><cms:entry id="N10195" part="chapter3" ref="N10195" type="block">3.1.1.1.</cms:entry><cms:entry id="N101A6" part="chapter3" ref="N101A6" type="block">3.1.1.2.</cms:entry><cms:entry id="N101B2" part="chapter3" ref="N101B2" type="subsection">3.1.2.</cms:entry><cms:entry id="N101B7" part="chapter3" ref="N101B7" type="block">3.1.2.1.</cms:entry><cms:entry id="N101BE" part="chapter3" ref="N101BE" type="pagenumber">14</cms:entry><cms:entry id="N101CA" part="chapter3" ref="N101CA" type="block">3.1.2.2.</cms:entry><cms:entry id="N101DB" part="chapter3" ref="N101DB" type="section">3.2.</cms:entry><cms:entry id="N101DF" part="chapter3" ref="N101DF" type="pagenumber">15</cms:entry><cms:entry id="N101FC" part="chapter3" ref="N101FC" type="section">3.3.</cms:entry><cms:entry id="N10204" part="chapter3" ref="N10204" type="subsection">3.3.1.</cms:entry><cms:entry id="N10208" part="chapter3" ref="N10208" type="pagenumber">16</cms:entry><cms:entry id="N10211" part="chapter3" ref="N10211" type="subsection">3.3.2.</cms:entry><cms:entry id="N1021A" part="chapter3" ref="N1021A" type="subsection">3.3.3.</cms:entry><cms:entry id="N1022D" part="chapter3" ref="N1022D" type="pagenumber">17</cms:entry><cms:entry id="N1023D" part="chapter3" ref="N1023D" type="section">3.4.</cms:entry><cms:entry id="N10242" part="chapter3" ref="N10242" type="subsection">3.4.1.</cms:entry><cms:entry id="N10247" part="chapter3" ref="N10247" type="block">3.4.1.1.</cms:entry><cms:entry id="N10259" part="chapter3" ref="N10259" type="block">3.4.1.2.</cms:entry><cms:entry id="N10266" part="chapter3" ref="N10266" type="subsection">3.4.2.</cms:entry><cms:entry id="N10270" part="chapter3" ref="N10270" type="pagenumber">18</cms:entry><cms:entry id="N10279" part="chapter3" ref="N10279" type="subsection">3.4.3.</cms:entry><cms:entry id="N10282" part="chapter3" ref="N10282" type="subsection">3.4.4.</cms:entry><cms:entry id="N1028E" part="chapter3" ref="N1028E" type="subsection">3.4.5.</cms:entry><cms:entry id="N10297" part="chapter3" ref="N10297" type="subsection">3.4.6.</cms:entry><cms:entry id="N102A0" part="chapter3" ref="N102A0" type="subsection">3.4.7.</cms:entry><cms:entry id="N102AA" part="chapter3" ref="N102AA" type="section">3.5.</cms:entry><cms:entry id="N102AE" part="chapter3" ref="N102AE" type="pagenumber">19</cms:entry><cms:entry id="N102BD" part="chapter3" ref="N102BD" type="section">3.6.</cms:entry><cms:entry id="N102C2" part="chapter3" ref="N102C2" type="subsection">3.6.1.</cms:entry><cms:entry id="N102CC" part="chapter3" ref="N102CC" type="pagenumber">20</cms:entry><cms:entry id="N102D3" part="chapter3" ref="N102D3" type="section">3.7.</cms:entry><cms:entry id="N102D8" part="chapter3" ref="N102D8" type="subsection">3.7.1.</cms:entry><cms:entry id="chapter4" part="chapter4" ref="chapter4" type="chapter">4.</cms:entry><cms:entry id="N102E7" part="chapter4" ref="N102E7" type="pagenumber">21</cms:entry><cms:entry id="N102EF" part="chapter4" ref="N102EF" type="section">4.1.</cms:entry><cms:entry id="N102FE" part="chapter4" ref="N102FE" type="section">4.2.</cms:entry><cms:entry id="N10311" part="chapter4" ref="N10311" type="table"/><cms:entry id="N10318" part="chapter4" ref="N10318" type="pagenumber">22</cms:entry><cms:entry id="N10471" part="chapter4" ref="N10471" type="table"/><cms:entry id="N10478" part="chapter4" ref="N10478" type="pagenumber">23</cms:entry><cms:entry id="N10587" part="chapter4" ref="N10587" type="section">4.3.</cms:entry><cms:entry id="N1059C" part="chapter4" ref="N1059C" type="section">4.4.</cms:entry><cms:entry id="N105B4" part="chapter4" ref="N105B4" type="pagenumber">24</cms:entry><cms:entry id="N105E2" part="chapter4" ref="N105E2" type="section">4.5.</cms:entry><cms:entry id="chapter5" part="chapter5" ref="chapter5" type="chapter">5.</cms:entry><cms:entry id="N105F9" part="chapter5" ref="N105F9" type="section">5.1.</cms:entry><cms:entry id="N1061F" part="chapter5" ref="N1061F" type="pagenumber">25</cms:entry><cms:entry id="N10628" part="chapter5" ref="N10628" type="section">5.2.</cms:entry><cms:entry id="N10660" part="chapter5" ref="N10660" type="section">5.3.</cms:entry><cms:entry id="chapter6" part="chapter6" ref="chapter6" type="chapter">6.</cms:entry><cms:entry id="N1068C" part="chapter6" ref="N1068C" type="pagenumber">26</cms:entry><cms:entry ref="chapter7" type="chapter">7.</cms:entry><cms:entry ref="N106B1" type="pagenumber">27</cms:entry><cms:entry ref="N106B8" type="table"/><cms:entry ref="_Ref20760729" type="link"/><cms:entry id="chapter8" part="chapter8" ref="chapter8" type="chapter">8.</cms:entry><cms:entry id="N1091F" part="chapter8" ref="N1091F" type="section">8.1.</cms:entry><cms:entry id="N10930" part="chapter8" ref="N10930" type="pagenumber">28</cms:entry><cms:entry id="N10942" part="chapter8" ref="N10942" type="section">8.2.</cms:entry><cms:entry id="N10961" part="chapter8" ref="N10961" type="pagenumber">29</cms:entry><cms:entry id="N10967" part="chapter8" ref="N10967" type="section">8.3.</cms:entry><cms:entry id="N10986" part="chapter8" ref="N10986" type="pagenumber">30</cms:entry><cms:entry id="N1099E" part="chapter8" ref="N1099E" type="section">8.4.</cms:entry><cms:entry id="N10A01" part="chapter8" ref="N10A01" type="pagenumber">31</cms:entry><cms:entry id="N10A61" part="chapter8" ref="N10A61" type="pagenumber">32</cms:entry><cms:entry id="N10ACC" part="chapter8" ref="N10ACC" type="pagenumber">33</cms:entry><cms:entry id="N10AD0" part="chapter8" ref="N10AD0" type="mm">614#732</cms:entry><cms:entry id="chapter9" part="chapter9" ref="chapter9" type="chapter">9.</cms:entry><cms:entry id="N10AE8" part="chapter9" ref="N10AE8" type="pagenumber">34</cms:entry><cms:entry id="N10B56" part="chapter9" ref="N10B56" type="pagenumber">35</cms:entry><cms:entry id="N10B5D" part="chapter9" ref="N10B5D" type="table"/><cms:entry id="_Ref20761768" part="chapter9" ref="_Ref20761768" type="link"/><cms:entry id="chapter10" part="chapter10" ref="chapter10" type="chapter">10.</cms:entry><cms:entry id="N118F4" part="chapter10" ref="N118F4" type="pagenumber">36</cms:entry><cms:entry id="N11982" part="chapter10" ref="N11982" type="pagenumber">37</cms:entry><cms:entry id="N119DF" part="chapter10" ref="N119DF" type="pagenumber">38</cms:entry><cms:entry id="N119F1" part="N119F1" ref="N119F1" type="bibliography">
				REFERENCES</cms:entry><cms:entry id="N119F5" part="N119F1" ref="N119F5" type="pagenumber">39</cms:entry><cms:entry id="N11BB7" part="N119F1" ref="N11BB7" type="pagenumber">40</cms:entry><cms:entry id="N11D8E" part="N119F1" ref="N11D8E" type="pagenumber">41</cms:entry><cms:entry id="N11F84" part="N119F1" ref="N11F84" type="pagenumber">42</cms:entry><cms:entry id="N1214D" part="N119F1" ref="N1214D" type="pagenumber">43</cms:entry><cms:entry id="N12348" part="N119F1" ref="N12348" type="pagenumber">44</cms:entry><cms:entry id="N124FF" part="N119F1" ref="N124FF" type="pagenumber">45</cms:entry><cms:entry id="N126AC" part="N119F1" ref="N126AC" type="pagenumber">46</cms:entry><cms:entry id="N1286A" part="N119F1" ref="N1286A" type="pagenumber">47</cms:entry><cms:entry id="N129C8" part="N129C8" ref="N129C8" type="abbreviation">Abbreviations</cms:entry><cms:entry id="N129CF" part="N129C8" ref="N129CF" type="table"/><cms:entry id="N12D86" part="N12D86" ref="N12D86" type="acknowledgement">
				Acknowledgements</cms:entry><cms:entry id="N12D8A" part="N12D86" ref="N12D8A" type="pagenumber">49</cms:entry><cms:entry id="N12DB7" part="N12DB7" ref="N12DB7" type="vita">
				Lebenslauf</cms:entry><cms:entry id="N12DBB" part="N12DB7" ref="N12DBB" type="pagenumber">50</cms:entry><cms:entry id="N12DC2" part="N12DB7" ref="N12DC2" type="table"/><cms:entry id="N12E31" part="N12DB7" ref="N12E31" type="table"/><cms:entry id="N12EBE" part="N12DB7" ref="N12EBE" type="table"/><cms:entry id="N12EF5" part="N12DB7" ref="N12EF5" type="table"/><cms:entry id="N12FBF" part="N12DB7" ref="N12FBF" type="table"/><cms:entry id="N13046" part="N12DB7" ref="N13046" type="table"/><cms:entry id="N13067" part="N12DB7" ref="N13067" type="pagenumber">51</cms:entry><cms:entry id="N131A5" part="N12DB7" ref="N131A5" type="table"/><cms:entry id="N131F3" part="N12DB7" ref="N131F3" type="table"/><cms:entry id="N1322D" part="N12DB7" ref="N1322D" type="pagenumber">52</cms:entry><cms:entry id="N13268" part="N13268" ref="N13268" type="declaration">
				Eidestattliche Erklärung</cms:entry><cms:entry id="N1326C" part="N13268" ref="N1326C" type="pagenumber">53</cms:entry><cms:entry type=":lang">en</cms:entry><cms:entry id=":contents" part="front" ref=":contents" type=":contents">Table of contents</cms:entry><cms:entry type=":help"><url href="http://...">Help</url></cms:entry></cms:meta><cms:content><chapter id="chapter7" label="7.">
			<head>PATIENTS AND TUMORS</head>
			<p>Frozen tumor tissue and corresponding blod samples were available from eight patients dia-gnosed with and operated for midgut carcinoid tumors during a 13-year period (August 1983 till February 1996) at the University hospital Uppsala, Sweden. Patients were identified through the medical archives and pathological reports. Access to the pathological and clinical data was approved by the institutional board and the regional research ethics committé. Six of the primary lesions originated in the ileum, one in the ileo-cecal valve and one in the ascending colon. Tissue from two primary tumors, four mesenteric metastases and two liver metastases were investi-gated. All eight tumors had metastasized to the liver and/or the small intestine mesenterium and/ or other sites at the time of surgery. In all patients the carcinoid tumors occurred sporadically as diagnosed by the lack of both personal and family history of the same tumor. The patients were four females and four males with an age range of 43 to 73 years. Clinical and pathological characteristics are displayed in Table 3.</p>
			<p>
				<pagenumber id="N106B1" label="27" numbering="arabic" start="27"/>
			</p>
			<p>
				<table frame="none" id="N106B8" orient="port" tocentry="1">
					<caption>
						<link id="_Ref20760729"/>Table 3. Clinical characteristics of cases with malignant midgut carcinoids subjected to genome- wide LOH screening (AWD=alive with disease)</caption>
					<tgroup align="left" char="" charoff="50" cols="6">
						<colspec colname="1" colnum="1"/>
						<colspec colname="2" colnum="2"/>
						<colspec colname="3" colnum="3"/>
						<colspec colname="4" colnum="4"/>
						<colspec colname="5" colnum="5"/>
						<colspec colname="6" colnum="6"/>
						<tbody valign="top">
							<row>
								<entry morerows="0" rotate="0" valign="top">
									<p>Tumor</p>
									<p>number</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>Localizationof primary tumor</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>Sample origin</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>Age at surgery (years)</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>Localization of</p>
									<p>metastases</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>Follow-up</p>
									<p>(years)</p>
								</entry>
							</row>
							<row>
								<entry morerows="0" rotate="0" valign="top">
									<p>2283</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>Ileum</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>Lymph node</p>
									<p>metastasis</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>50</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>Mesenteric lymph nodes,</p>
									<p>Liver</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>AWD (10)</p>
								</entry>
							</row>
							<row>
								<entry morerows="0" rotate="0" valign="top">
									<p>2762</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>Ileum</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>Primary tumor</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>73</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>Mesenteric lymph nodes,</p>
									<p>Liver</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>AWD (9)</p>
								</entry>
							</row>
							<row>
								<entry morerows="0" rotate="0" valign="top">
									<p>4017</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>Ileo-cecal</p>
									<p>valve</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>Liver metastasis</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>71</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>Mesenteric lymph nodes,</p>
									<p>liver</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>AWD (7)</p>
								</entry>
							</row>
							<row>
								<entry morerows="0" rotate="0" valign="top">
									<p>5184</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>Ileum</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>Primary tumor</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>46</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>Mesenteric lymph nodes,</p>
									<p>liver</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>AWD (5)</p>
								</entry>
							</row>
							<row>
								<entry morerows="0" rotate="0" valign="top">
									<p>5216</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>Ileum</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>Liver metastasis</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>72</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>Mesenteric lymph nodes, </p>
									<p>liver</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>AWD (5)</p>
								</entry>
							</row>
							<row>
								<entry morerows="0" rotate="0" valign="top">
									<p>5692</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>Right Colon </p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>Lymph node</p>
									<p>metastasis</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>70</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>Mesenteric lymph nodes,</p>
									<p>liver</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>AWD (4.5)</p>
								</entry>
							</row>
							<row>
								<entry morerows="0" rotate="0" valign="top">
									<p>5718</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>Ileum</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>Lymph node </p>
									<p>metastasis</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>55</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>Mesenteric lymph nodes,</p>
									<p>liver, breast</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>AWD (4)</p>
								</entry>
							</row>
							<row>
								<entry morerows="0" rotate="0" valign="top">
									<p>5807</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>Ileum</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>Lymph node</p>
									<p>metastasis</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>43</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>Mesenteric lymph nodes, </p>
									<p>liver, bone</p>
								</entry>
								<entry morerows="0" rotate="0" valign="top">
									<p>AWD (4)</p>
								</entry>
							</row>
						</tbody>
					</tgroup>
				</table>
			</p>
		</chapter></cms:content></cms:document></cms:container>