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[Seite 56↓] Publikationsverzeichnis

Originalpublikationen:

1. Ghadimi MP, Sanzenbacher R, Thiede B, Wenzel J, Jing Q, Plomann M, Borkhardt A, Kabelitz D, Janssen O, Identification of the interaction partners of the cytosolic polyproline region of CD95 ligand (CD178), FEBS Lett 2002, 519, 50-58. (Impact 2000: 3.440).

2. Thiede B, Siejak F, Dimmler C, Rudel T, Prediction of translocation and cleavage of heterogeneous nuclear ribonucelar proteins and Rho guanine dissociation inhibitor 2 during apoptosis by subcellular proteome analysis, Proteomics , 2002, 1, 996-1006 . (Impact 2000: 3.385).

3. Thiede B, Dimmler C, Siejak F, Rudel T, Predominant identification of RNA-binding proteins in Fas-induced apoptosis by proteome analysis, J. Biol. Chem, 2001, 276, 26044-26050. (Impact 2000: 7.368).

4. Ketudat-Cairns JR, Champattanachai V, Srisomsap C, Wittmann-Liebold B, Thiede B, Svasti J, Sequence and expression of Thai Rosewood beta-glucosidase/beta-fucosidase, a family 1 glycosyl hydrolase glycoprotein, J. Biochem. (Tokyo) , 2000, 128, 999-1008. (Impact 2000: 2.116).

5. O'Brien TW, Liu J, Sylvester JE, Mougey EB, Fischel-Ghodsian N, Thiede B, Wittmann-Liebold B, Graack HR Mammalian mitochondrial ribosomal proteins (4), J. Biol. Chem, 2000, 275, 18153-18159. (Impact 2000: 7.368).

6. Thiede B, Lamer S, Mattow J, Siejak F, Dimmler C, Rudel T, Jungblut, PR Analysis of missed cleavage sites, tryptophan oxidation and N-terminal pyroglutamylation after in-gel tryptic digestion, Rapid Commun. Mass Spectrom., 2000, 14, 496-502. (Impact 2000: 2.184).

7. Thiede B und Wittmann-Liebold B, Analysis of RNA-protein cross-link sites by matrix-assisted laser desorption/ionization mass spectrometry and N-terminal microsequencing. Methods Enzymol ., 2000, 318, 438-446. (Impact 2000: 2.340).

8. Thiede B, Siejak F, Dimmler C, Jungblut PR, Rudel T, A two dimensional database of a human Jurkat T-cell line, Electrophoresis, 2000, 21, 2713-2720. (Impact 2000: 3.385).

9. Greuer B., Thiede B., Brimacombe R, The cross-link from the upstream region of mRNA to ribosomal protein S7 is located in the C-terminal peptide: Experimental verification of a prediction from modeling studies, RNA, 1999, 5, 1521-1525. (Impact 2000: 5.046).

10. O´Brien TW, Fiesler SE, Denslow ND, Thiede B, Wittmann-Liebold B, Mougey EB, Sylvester JE, Graack HR, Mammalian mitochondrial ribosomal proteins, J. Biol. Chem ., 1999, 274, 36043-36051. (Impact 2000: 7.368).


[Seite 57↓]

11. Thiede B, Urlaub H, Neubauer H, Grelle G, Wittmann-Liebold B, Precise determination of RNA-protein contact sites in the 50S ribosomal subunit of Escherichia coli, Biochem. J ., 1998, 334, 39-42. (Impact 2000: 4.280).

12. Thiede B und von Janta-Lipinski M, Noncovalent RNA-peptide complexes detected by matrix-assisted laser desorption/ionization mass spectrometry, Rapid Commun. Mass Spectrom ., 1998, 12, 1889-1894. (Impact 2000: 2.184).

13. Goletz S, Thiede B, Hanisch FG, Schultz M, Peter-Katalinic J, Müller S, Seitz O, Karsten U, A sequencing strategy for the localization of O-glycosylation sites of MUC1 tandem repeats by PSD-MALDI mass spectrometry, Glycobiology, 1997, 7, 881-896. (Impact 2000: 3.419).

14. Stulik J, Kovarova H, Macela A, Bures J, Jandik P, Langr F, Otto A, Thiede B, Jungblut P, Overexpression of calcium-binding protein calgranulin B in colonic mucosal diseases, Clin. Chim. Acta, 1997, 265, 41-55. (Impact 2000: 1.041).

15. Thiede B, Salnikow J, Wittmann-Liebold B, C-terminal ladder sequencing by an approach combining chemical degradation with analysis by matrix-assisted-laser-desorption ionization mass spectrometry, Eur. J. Biochem., 1997, 244, 750-754. (Impact 2000: 2.852).

16. Urlaub H, Thiede B, Müller EC, Brimacombe R, Wittmann-Liebold B, Identification and sequence analysis of contact sites between ribosomal proteins and rRNA in Escherichia coli 30 S subunits by a new approach using matrix-assisted laser desorption/ionization mass spectrometry combined with N-terminal microsequencing, J. Biol. Chem , 1997, 272, 14547-14555. (Impact 2000: 7.368).

17. Urlaub H, Thiede B, Müller EC, Wittmann-Liebold B, Contact sites of peptide-oligoribonucleotide cross-links identified by a combination of peptide and nucleotide sequencing with MALDI-MS, J. Prot. Chem., 1997, 16, 375-383. (Impact 2000: 0.745).

18. Mirgorodskaya, O, Kazanina G, Mirgorodskaya E, Matveyev V, Thiede B, Khaitlin S, Proteolytic cleavage of melittin with the actin-digesting protease, Prot. Pep. Lett ., 1996, 3, 81-88. (Impact 2000: 0.468).

19. Müller EC, Thiede B, Zimny-Arndt U, Scheler C, Prehm J, Müller-Werdan U, Wittmann-Liebold B, Otto, A, Jungblut, P. High-performance human myocardial two-dimensional electrophoresis database: Edition 1996, Electrophoresis, 1996, 17, 1700-1712. (Impact 2000: 3.385).

20. Otto A, Thiede B, Müller EC, Scheler C, Wittmann-Liebold B, Jungblut P, Identification of human myocardial proteins separated by two-dimensional electrophoresis using an effective sample preparation for mass spectrometry, Electrophoresis, 1996, 17, 1643-1650. (Impact 2000: 3.385).

21. Thiede, B, Otto, A, Zimny-Arndt U, Müller EC, Jungblut P, Identification of human myocardial proteins separated by two-dimensional electrophoresis with matrix-assisted laser desorption/ionization mass spectrometry, Electrophoresis, 1996, 17, 588-599. (Impact 2000: 3.385).


[Seite 58↓]

22. Vater J, Heinze K, Friedrich B, Kablitz B, Blokesch A, Irrgang KD, Thiede B, Salnikow J, Novel methodology for topological studies of photosynthetic membrane protein complexes. Ber. Bunsenges. Phys. Chem . , 1996 , 100 , 2107-2111 . (Impact 2000: 1.531).

23. Vladimirov SN, Ivanov AV, Karpova GG, Musolyamov AK, Egorov TA, Thiede, B, Wittmann-Liebold B, Otto A , Characterization of the human small ribosomal subunit proteins by N-terminal and internal sequencing and mass spectrometry , Eur. J. Biochem ., 1996 , 239 , 144-149 . (Impact 2000: 2.852).

24. Wagner D, Salnikow J, Otto A, Thiede B, Vater J, A protein chemical analysis of the heterogeneity of the small subunit of ribulose-1,5-bisphosphate carboxylase oxygenase from zea mays, Plant Sci., 1996, 113, 13-20. (Impact 2000: 1.259).

25. Thiede B, Wittmann-Liebold B, Bienert M, Krause E, MALDI-MS for C-terminal sequence determination of peptides and proteins degraded by carboxypeptidase Y and P, FEBS Lett ., 1995, 357, 65-69. (Impact 2000: 3.440).

Übersichtsartikel

1. Jungblut P und Thiede B, Protein identification from 2-DE gels by MALDI mass spectrometry, Mass Spectrom. Rev ., 1997, 16, 145-162. (Impact 2000: 7.600).

2. Jungblut P, Thiede B, Zimny-Arndt U, Müller EC, Scheler C, Wittmann-Liebold B, Otto A, Resolution power of two-dimensional electrophoresis and identification of proteins from gels, Electrophoresi s, 1996, 17, 839-847. (Impact 2000: 3.385).

Buchartikel

1. Thiede B, Urlaub H, Neubauer H, Wittmann-Liebold B, Identification and sequence analysis of RNA–protein contact sites by N-terminal sequencing and MALDI-MS, in: RNA-protein interaction protocols, Eds. Haynes, S., Humana Press, Totowa, NJ, USA. Methods Mol. Biol., 1999, 118, 63-72.

2. Thiede B, Mass spectrometry in peptide and protein sequence analysis, in: Protein Structure Analysis: Preparation, Characterization, and Microsequencing, Eds. Kamp, RM, Choli-Papadopoulou, D and Wittmann-Liebold, B., Springer-Verlag, Berlin-Heidelberg-New York, 1997, 279-293.

3. Thiede B, Carboxy-terminal sequencing by combining carboxypeptidase Y and P digestion with matrix-assisted laser desorption/ionization mass spectrometry, in: Protein Structure Analysis: Preparation, Characterization, and Microsequencing, Eds. Kamp, RM, Choli-Papadopoulou, D and Wittmann-Liebold, B., Springer-Verlag, Berlin-Heidelberg-New York, 1997, 295-302.


[Seite 59↓]

Abstract

1. Wittmann-Liebold B, Seidemann B, Wittmann B, Thiede B, Proteome research: Identification of disease-associated proteins by sophisticated techniques, Eur. J. Cell Biol ., 1999, 78 (Suppl. 49), 92.

2. Bischof O, Hechenberger M, Thiede B, Kruft V, Wittmann-Liebold B, Investigations of protein-antibiotic cross-links in prokaryotic ribosomes by sequence analysis and mass spectrometry. J. Prot. Chem ., 1994, 13, 477-478.

Wissenschaftliche Vorträge

DGMS 2002, Heidelberg, Proteomics of apoptosis in T cell.


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