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2013-10-18Zeitschriftenartikel DOI: 10.1159/000354322
Analysis of the Complete Genomes of Acholeplasma brassicae, A. palmae and A. laidlawii and Their Comparison to the Obligate Parasites from ‘Candidatus Phytoplasma'
dc.contributor.authorKube, Michael
dc.contributor.authorSiewert, Christin
dc.contributor.authorMigdoll, Alexander M.
dc.contributor.authorDuduk, Bojan
dc.contributor.authorHolz, Sabine
dc.contributor.authorRabus, Ralf
dc.contributor.authorSeemüller, Erich
dc.contributor.authorMitrovic, Jelena
dc.contributor.authorMüller, Ines
dc.contributor.authorBüttner, Carmen
dc.contributor.authorReinhardt, Richard
dc.date.accessioned2019-11-20T11:07:29Z
dc.date.available2019-11-20T11:07:29Z
dc.date.issued2013-10-18none
dc.date.updated2019-09-23T13:50:21Z
dc.identifier24158107
dc.identifier.issn1464-1801
dc.identifier.urihttp://edoc.hu-berlin.de/18452/21528
dc.description.abstractAnalysis of the completely determined genomes of the plant-derived Acholeplasma brassicae strain O502 and A. palmae strain J233 revealed that the circular chromosomes are 1,877,792 and 1,554,229 bp in size, have a G + C content of 36 and 29%, and encode 1,690 and 1,439 proteins, respectively. Comparative analysis of these sequences and previously published genomes of A. laidlawii strain PG-8, ‘Candidatus Phytoplasma asteris' strains, ‘Ca. P. australiense' and ‘Ca. P. mali' show a limited shared basic genetic repertoire. The acholeplasma genomes are characterized by a low number of rearrangements, duplication and integration events. Exceptions are the unusual duplication of rRNA operons in A. brassicae and an independently introduced second gene for a single-stranded binding protein in both genera. In contrast to phytoplasmas, the acholeplasma genomes differ by encoding the cell division protein FtsZ, a wide variety of ABC transporters, the F₀F<sub>1</sub> ATP synthase, the Rnf-complex, SecG of the Sec-dependent secretion system, a richly equipped repertoire for carbohydrate metabolism, fatty acid, isoprenoid and partial amino acid metabolism. Conserved metabolic proteins encoded in phytoplasma genomes such as the malate dehydrogenase SfcA, several transporters and proteins involved in host-interaction, and virulence-associated effectors were not predicted for the acholeplasmas.eng
dc.language.isoengnone
dc.publisherHumboldt-Universität zu Berlin
dc.rights.urihttps://www.karger.com/Services/SiteLicenses
dc.subjectComplete genomeseng
dc.subjectAcholeplasma palmaeeng
dc.subjectAcholeplasma brassicaeeng
dc.subjectCandidatus phytoplasmaeng
dc.subject.ddc570 Biologienone
dc.titleAnalysis of the Complete Genomes of Acholeplasma brassicae, A. palmae and A. laidlawii and Their Comparison to the Obligate Parasites from ‘Candidatus Phytoplasma'none
dc.typearticle
dc.identifier.urnurn:nbn:de:kobv:11-110-18452/21528-2
dc.identifier.doi10.1159/000354322none
dc.identifier.doihttp://dx.doi.org/10.18452/20790
dc.type.versionpublishedVersionnone
local.edoc.container-titleJournal of Molecular Microbiology and Biotechnologynone
local.edoc.pages18none
local.edoc.anmerkungThis publication is with permission of the rights owner freely accessible due to an alliance licence and a national licence (funded by the DFG, German Research Foundation) respectively.none
local.edoc.type-nameZeitschriftenartikel
local.edoc.institutionLebenswissenschaftliche Fakultätnone
local.edoc.container-typeperiodical
local.edoc.container-type-nameZeitschrift
local.edoc.container-publisher-nameS. Karger AGnone
local.edoc.container-publisher-placeBasel, Switzerlandnone
local.edoc.container-volume24none
local.edoc.container-issue1none
local.edoc.container-firstpage19none
local.edoc.container-lastpage36none
dc.description.versionPeer Reviewednone
dc.identifier.eissn1660-2412

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